Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g03263 ATGTGTCCACGCCGCCCTGCTGCGTTTAGCCGCCGACCGTCGCACGCCACTCTCTGCAATCATCCCAGTGTTCTCCAATTGTTCAGGGATGTGAAGAGCAATAACATATTGCTTGATCATGAGTTTAGGCCTCATGCAGCGAATTTTGGGCTTGCTAAGACCTTGCAGCGTGAGGCAGGTGACAGAGATGCTGGTGCTGGTGCCAGTGCCATGTCCAGAGTTCCTGGATCATATGAATACATTGCCCCGGGAGCAAAGCTTATAAATGATTGA 273 0.5128 MCPRRPAAFSRRPSHATLCNHPSVLQLFRDVKSNNILLDHEFRPHAANFGLAKTLQREAGDRDAGAGASAMSRVPGSYEYIAPGAKLIND 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g03263 90 SUPERFAMILY Protein kinase-like (PK-like) 27 83 IPR011009 -
Aip01g03263 90 Gene3D Transferase(Phosphotransferase) domain 1 15 87 - -
Aip01g03263 90 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE HSL2 27 84 - -
Aip01g03263 90 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 27 84 - -
Aip01g03263 90 ProSiteProfiles Protein kinase domain profile. 1 90 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g03263 Aip-Chr1 135794489 135795548 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g03263 29 83 Receptor kinase-like Gene Family AT5G65710 63.636 1.16e-15 68.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Aip01g03263 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g03263 - - aip:107642268 100.523