Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g03261 ATGAATAATTTCCATCCAAACACTTCTCTTCACCTGAGTCATCATCATCATCATCACTTACCTACTGCAGATGAGAATTCAATCAACCTTGACCTTCTTCTTGAACCTTCTTCTTCTTCAACTTCTTCATCTTCACCTCTTAGTGGTGGTGGTGGTGGTAATAATTATAATAATATGACAGAGGCAAGGGTATTCTCATGCAACTACTGCCAAAGAAAGTTCTACAGCTCTCAGGCCTTGGGAGGACACCAGAACGCTCACAAGCTTGAAAGGACGCTGGCCAAGAAGACCAGGGAGATCACTTCATCCATGCAAGATCACAGATCAAACTTCATCAATTCTACTACTACTACTACATCACATCATGCTTTTGGTGTTCTTGAGAACCATGTCCATGGTGCTGGAGGAAGAAGAGATAACAATAGCTTCAGCTACGGCGGTTCAAAACAATTAGGTGTGGCTGCTTCTTGGTCCCGTGGTTACACTACTACTACTTCTGAAAATGTTCATCAGGAAGATATTAGCCAACTTGACTTGTCATTAAGGCTTTGA 552 0.4203 MNNFHPNTSLHLSHHHHHHLPTADENSINLDLLLEPSSSSTSSSSPLSGGGGGNNYNNMTEARVFSCNYCQRKFYSSQALGGHQNAHKLERTLAKKTREITSSMQDHRSNFINSTTTTTSHHAFGVLENHVHGAGGRRDNNSFSYGGSKQLGVAASWSRGYTTTTSENVHQEDISQLDLSLRL 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g03261 183 PANTHER ZINC FINGER PROTEIN JAGGED 26 183 IPR045320 GO:0003700
Aip01g03261 183 Gene3D Classic Zinc Finger 54 123 - -
Aip01g03261 183 MobiDBLite consensus disorder prediction 35 54 - -
Aip01g03261 183 ProSitePatterns Zinc finger C2H2 type domain signature. 67 87 IPR013087 -
Aip01g03261 183 SUPERFAMILY beta-beta-alpha zinc fingers 61 92 IPR036236 -
Aip01g03261 183 PANTHER ZINC FINGER PROTEIN 2 26 183 - -
Aip01g03261 183 ProSiteProfiles Zinc finger C2H2 type domain profile. 65 92 IPR013087 -
Aip01g03261 183 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g03261 Aip-Chr1 135747386 135747937 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g03261 3 183 C2H2 Transcription Factor Family AT5G57520 44.199 9.86e-29 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g03261 - - aip:107620426 310.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g03261 01 135747386 135747937 Aip01g03261 01 135747386 135747937 ECH