Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g03252 ATGCAGAGGGCAGCTGGGGACGCAAAAAGCATGGGGAAGAGGTCTCTTGAAGGTGGAGAAGATGACCAGCCTGAACGAAAGAGGCCTGCTCTTGCCAGTGTTATTGTGGAAGCTCTCAAGGTGGACAGTTTGCAGAAACTTTGCTCATCATTAGAACCTATTCTTCGTAGAGTTGTGAGTGAAGAAGTGGAGCGTGCTCTTGTGAAGTTGGGTCCTGCAAGAATTAGTGGTGGAAGGTCTTCTCCAAAAATGATTGAAGGTCCGGATGGCAGGAACCTGCAGCTGCATTTTAGGTCCCGGCTGTCTCTTCCCCTATTCACTGGAGGAAAAGTGGAAGGCGAGCAGGGGGCTCCAATCCATGTTGTTCTTATTGATGCCAATACTGGAAGTGTTGTGACATCTGGTCCAGAAGCCTGTATGAAACTTGATGTTGTTGTCCTTGAGGGTGATTTTAATAATGAGGATGATGAAGGTTGGACTCAAGAGGAATTTGAAAGCCATGTGGTGAAGGAACGTGAAGGAAAGAGACCCCTGTTGACTGGGGAGCTGCAAGTGACACTCAAAGAAGGAGTTGGGACATTGGGGGAACTGACGTTCACAGATAATTCAAGCTGGATAAGGAGCCGGAAATTCAGGCTTGGGTTGAAGGTTGCGCAAGGTTTTTCCGAGTCTGTGCGCATCCGTGAAGCTAAAACAGAGGCTTTTACAGTCAAAGATCATAGAGGAGAATTATATAAGAAGCATTATCCTCCGGCATTGACTGATGATGTATGGAGACTGGAGAAGATAGGCAAGGATGGGTCATTTCACAAGAAGCTGAATAATGCTGGAATATTCACTGTTGAAGACTTTCTTCGTCTTGTGGTTAAAGATCAACAGAAATTGCGGAATATCCTTGGAAGTGGTATGTCAAACAAGATGTGGGAAGCTCTCTTAGAGCATGCAAAGACTTGTGTCCTAAGTGGGAAGCTCTATGTTTATTACCCAGAAGATACGAGAAATGTTGGTGTTATTTTTAACCACATCTATGAGCTGCGTGGTCTTTGTTTTTCTCTAAAAGTTGGGAATGCCTTTCTGTTGGTTTATGTGGATTCGTTGGTGAAGAAGGCATATGAGAATTGGGAGCAGGTTGTAGAGTATGATGGGAAAACACTTGTGGGTGCTGCACAAAATGATAGGCCGGATACACCTGAAAATGAACTTCCGATGGAGTCAATCAATTACACTACTGGTTTAGATCATCAGCTGCAATCACAATCCCTTCCAGTGTCTGTTCCATCTCAACATCAAATGAATTCAGGGATGCTGGTTGGAGGTTATAATGATAATTTGGTAACAAGATACCCAAACCAGCCACTGATAGCAAACTCCAACTCCCGGAGCCAGTTTGACAGTTCATTATACCTGTCTAGTGACCAATTAATGAACAATGCGCACCAAAGCCAGAACACGAGAAATGATCATAGCACGGTTGGGTTAGCTCTTGGTCCTCCTCAATCATCATCAGGGTTCCACGCTGAGGAAGAAATCCGCTTAAGAAGTCACGAGATGCTAGAGAATGAGGACATGCAGCACTTGCTTCGCCTGTTCAGCATGGGAGGTCATGCCCCCACGAATACTGACGATAGCTTCTCATTCCCATCATTTATGCAAACGCCAATGCCAAACTTTGATGAGGATCGCGCTCGTCCAGGCAGAGCAGTTGTGGGATGGCTAAAGATCAAGGCAGCAATGAGGTGGGGCTTCTTTATCCGGAAGATAGCAGCTGAGAAGCGGGCACAGATAGAGGAGTTAGATGATTAG 1803 0.4559 MQRAAGDAKSMGKRSLEGGEDDQPERKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALVKLGPARISGGRSSPKMIEGPDGRNLQLHFRSRLSLPLFTGGKVEGEQGAPIHVVLIDANTGSVVTSGPEACMKLDVVVLEGDFNNEDDEGWTQEEFESHVVKEREGKRPLLTGELQVTLKEGVGTLGELTFTDNSSWIRSRKFRLGLKVAQGFSESVRIREAKTEAFTVKDHRGELYKKHYPPALTDDVWRLEKIGKDGSFHKKLNNAGIFTVEDFLRLVVKDQQKLRNILGSGMSNKMWEALLEHAKTCVLSGKLYVYYPEDTRNVGVIFNHIYELRGLCFSLKVGNAFLLVYVDSLVKKAYENWEQVVEYDGKTLVGAAQNDRPDTPENELPMESINYTTGLDHQLQSQSLPVSVPSQHQMNSGMLVGGYNDNLVTRYPNQPLIANSNSRSQFDSSLYLSSDQLMNNAHQSQNTRNDHSTVGLALGPPQSSSGFHAEEEIRLRSHEMLENEDMQHLLRLFSMGGHAPTNTDDSFSFPSFMQTPMPNFDEDRARPGRAVVGWLKIKAAMRWGFFIRKIAAEKRAQIEELDD 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g03252 600 Pfam Calmodulin binding protein central domain 253 318 IPR046830 -
Aip01g03252 600 MobiDBLite consensus disorder prediction 13 27 - -
Aip01g03252 600 Pfam Calmodulin binding protein C-terminal domain 323 380 IPR046829 -
Aip01g03252 600 PANTHER OS02G0177800 PROTEIN 9 505 IPR012416 GO:0005516
Aip01g03252 600 PANTHER CALMODULIN-BINDING PROTEIN 60 B 504 599 - -
Aip01g03252 600 PANTHER OS02G0177800 PROTEIN 504 599 IPR012416 GO:0005516
Aip01g03252 600 Pfam Calmodulin binding protein-like N-terminal domain 93 240 IPR046831 -
Aip01g03252 600 MobiDBLite consensus disorder prediction 1 27 - -
Aip01g03252 600 PANTHER CALMODULIN-BINDING PROTEIN 60 B 9 505 - -
Aip01g03252 600 Coils Coil 588 600 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g03252 Aip-Chr1 135696644 135700378 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g03252 1 595 Calmodulin-binding Proteins AT5G57580 64.396 0.0 796
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g03252 - - cam:101488801 973.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g03252 01 135696644 135700378 Aip01g03252 01 135696644 135700378 ECH