Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g03243 ATGGGGTTTGAGAAACATATTGGTAAGTATAGGCTTGGAAGGACAATTGGAGAAGGAACATTCTCTAAGGTTAAGCTTGCTGTTAATGAAGACAATGGAGAGAAAGTTGCAATCAAAGTCATTGATAAGCATATGGTCATGGAAAACAATCTTAAGAACCAGGTCAAAAGAGAGATTAGTACAATGAAACTTCTGCATCATCCCAATATTGTCAGAATTTTCGAGGTGATTGGGACAAAAACAAAAATATACATTGTGATGGAATATGTCTCAGGAGGACAAGTACTAGACAAGATGTCCTATGAGAAGAAGCTGAATGAACATGTGGCAAGGAAACTATTCCAGCAGCTTATTGATGCCATGGACTATTGCCATAACAAAGGAGTCTATCACAGAGATCTCAAGCCAGAAAACCTGTTGCTTGACAGCAAAGGAAACCTCAAAGTGTCTGACTTTGGATTAAGTGCACTCCAAAAGCCTAATGATGTCTTAAACACACGGTGTGGCTCCCCATGTTATGTGGCACCTGAGTTGATACTGAGCAAGGGATATGATGGAGCTTCTGCTGATGTTTGGTCATGTGGGGTGATTCTTTTTGAATTACTTGCAGGCTTCTTACCATTTGATGATCACAATTTGATGAACTTATATGAGAAGATATGCAGAGCAGCATACAAATGTCCACCATGGTTTACTCAAAGTCAAAAGAAACTAATTGCCAAAATATTTGTACCACGTCCTGGAAAGAGGATAACTATTCCAGATATTATTGAAGATGAGTGGTTTCAAACAGATTATGAACCTGCTTGTGTATCTGAATGTGATAAGAACATTAAGCTGGATGATTGTAATGTTGCATTTGATTCAGTTGAGGAGAAAATCAGAGAATCAAAGATACCAAAGTCCTCAAGTTTTATTAATGCATTTCAACTAATAGCCATGTCACAGGACCTTGATCTTTCTGGCCTTTTTGAAGAAGAACAGGATCACAAGAAGCAGAAGACAAGGTTTGGATCCAAACACACAATCAATGAAACAACGGAAAAAATTGAAGCTGCTGCAACAGATATGAGGTTGTCAGTAGAGAAAATAAACAACTTTAAGATAAAATTACACCCGAAACAGATGATGAATAGATGTTCTAGATCATACTTTGACCTATCAGCCCAGTTGATTGAAGTTGCTCCAACTCATTGTGTTGTAGAGATATCAAGATCTGCAGGAGATCTAAGAACATATACCAAATTCTGTGAAAGTCTATCAAGTCTGCTGGAACAAAAATCTGGTTTGACATCATCACAGGAGCAAGAAGAATCTAAGGATGTTGCTGATTCAACGCATTTATGA 1347 0.3779 MGFEKHIGKYRLGRTIGEGTFSKVKLAVNEDNGEKVAIKVIDKHMVMENNLKNQVKREISTMKLLHHPNIVRIFEVIGTKTKIYIVMEYVSGGQVLDKMSYEKKLNEHVARKLFQQLIDAMDYCHNKGVYHRDLKPENLLLDSKGNLKVSDFGLSALQKPNDVLNTRCGSPCYVAPELILSKGYDGASADVWSCGVILFELLAGFLPFDDHNLMNLYEKICRAAYKCPPWFTQSQKKLIAKIFVPRPGKRITIPDIIEDEWFQTDYEPACVSECDKNIKLDDCNVAFDSVEEKIRESKIPKSSSFINAFQLIAMSQDLDLSGLFEEEQDHKKQKTRFGSKHTINETTEKIEAAATDMRLSVEKINNFKIKLHPKQMMNRCSRSYFDLSAQLIEVAPTHCVVEISRSAGDLRTYTKFCESLSSLLEQKSGLTSSQEQEESKDVADSTHL 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g03243 448 Gene3D Phosphorylase Kinase; domain 1 2 89 - -
Aip01g03243 448 ProSitePatterns Protein kinases ATP-binding region signature. 16 39 IPR017441 GO:0005524
Aip01g03243 448 SMART serkin_6 10 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g03243 448 Gene3D Kinase associated domain 1, KA1 301 427 - -
Aip01g03243 448 CDD CIPK_C 307 426 - -
Aip01g03243 448 SUPERFAMILY Protein kinase-like (PK-like) 7 289 IPR011009 -
Aip01g03243 448 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Aip01g03243 448 MobiDBLite consensus disorder prediction 427 448 - -
Aip01g03243 448 ProSiteProfiles Protein kinase domain profile. 10 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g03243 448 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 21-RELATED 6 429 - -
Aip01g03243 448 Gene3D Transferase(Phosphotransferase) domain 1 90 288 - -
Aip01g03243 448 ProSiteProfiles NAF domain profile. 301 325 IPR018451 GO:0007165
Aip01g03243 448 PANTHER SERINE/THREONINE KINASE 6 429 - -
Aip01g03243 448 Pfam Protein kinase domain 10 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g03243 448 Pfam NAF domain 304 363 IPR004041 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g03243 Aip-Chr1 135618293 135621379 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g03243 6 420 CBL-interacting serine-threonine protein kinases AT1G01140 47.847 1.33e-145 421
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Aip01g03243 Pkinase 3.5e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g03243 - - gmx:100786097 707.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g03243 01 135618293 135621379 Aip01g03243 01 135618293 135621379 ECH