Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g03237 ATGGTGCTTGCTTACCCTTCTAAGGTGCTAGTTGGACTCTCTTTGGACTCAGATGACAGCAAGGAGCTTCTCTCATGGGCAATAAGAGTCCTTGCCAATCCAAATGACAGCATTGTGGCAGTGCATGTTCTTGTTACTGAGGATAAGAAGAAGCGCGCCTCGGTCAGAAAGAGGCAATCACAACTTCGGCAAGCAAAGGCTCATGTCATATCTATGCTTGGAGAATTTGCACAAACATGTTGGTCTAAGCAGGTTAATCTGGAGGCAAGAGTGGCATTCAGTTCCACAGTAGGTGGAGGTTTAGCTGAGGAAGCCAAGTCCATCAATGCTGATTTTCTTCTTCTACGTGGCTCAAGAAATCCAAAAAACAAGAATGGAAGTTCCAAGGGAATTAGCAAGTATTGCTTTGAGCATGCACATGAAGGCTGCACTGTGGTCTCGGTTGGGAAATTCGCCAAGGCAGAGCAAGGTACCAGTTCAAATCCAAAGCATTCTCAAGGTAATGACAGTGAAGCAAGTTCTAAATGGTTATCTAAGGATGATGACAATCAAGGTGACAAGGCTGCTACCTTCCCTGTTCTGAATGAATTCATGTCTGACTCTGAGTCTAAAGAACAGAACAGTTCGCCAAGAACAGTACTAGATGCGCTGGAAGGGCAATCTAACAGCACAGAAGATGATACATTCAGCACTATGGTCTCAAGCACCTGCACCACAGATACACCTAAGAGAAGATCAAAGCCTCAATCTCCCTTGAGGCGCATAGCCTCCTTCCTCGGATCACCATTCCGAAGAAAACATAGCATGTCCAAGAATGAAAAGGCTCAGCCCTTGTTGAAGTGCTTCAGCTATGAGCAGATAGCCAATGCTACTAATGAATTCCACCAAGATAATTTGGTCGGGAGAGGCGGATACTCAGAAGTATACAAAGGTGATCTTTGTGATGGAAGAAGCATTGCTGTGAAGAGATTGGCGAAGGACAACAATGATCCTAACAAGGAGAAAGAGTTCCTCATGGAATTGGGAGTTATTGGACATGTCTGCCATCCTAACACTGCATCCTTAGTTGGATGCTGCGTCGAAAATGGACTCTATCTAGTCTTCAATTACTCTCAGAATGGAAACTTGGCAACTGCATTGCACGGTAAAGGTGGAGATTCACTTGACTGGCCAATCAGATACAAGATTGCTATTGGAGTTGCAAGGGGGCTCCATTACCTTCATAAATGTTGCAAACACAGGATAATTCATCGCGATATCAAAGCTTCCAATGTTCTTCTAGGCCCTGATTATGAGCCACAGATAACAGATTTTGGGCTTGCAAAGTGGCTTCCAAACAAGTGGAGTCATCATGCAGTGATCCCAGTAGAGGGGACATTCGGATACTTAGCACCAGAGTACTTCATGCATGGAATAGTGGATGAGAAAACAGATGTTTTTGCATTTGGTGTTCTTCTTCTTGAGATTGTAACTGGACGCAGACCTGTTGATTCATCAAGCCAAAATCTTCTCCTTTGGGCAAAGCCTCTGATGGAATCAGGGAATATTGGAGAGCTAGCTGATCCAAAAATGGATGGTAAATATGATGAAGAGCAACTCTATAGGTTGGTGCTTACAGCTTCATACTGTGTCAGACAAAATGCCACGTGGCGCCCTCCAATGAGCGAGGTGTTAGAGTTGCTGGCAAGTGGGAATGACTGTGAGGCAGGGAAAAGTTGGAGGATCCCAAAATTCACTTCAGATGAATTGGATGATTATTCTATGGTGTTTGGATATGATGTCCCCTCACACATATCTCTCGAGGATTTTCTCTGA 1815 0.4441 MVLAYPSKVLVGLSLDSDDSKELLSWAIRVLANPNDSIVAVHVLVTEDKKKRASVRKRQSQLRQAKAHVISMLGEFAQTCWSKQVNLEARVAFSSTVGGGLAEEAKSINADFLLLRGSRNPKNKNGSSKGISKYCFEHAHEGCTVVSVGKFAKAEQGTSSNPKHSQGNDSEASSKWLSKDDDNQGDKAATFPVLNEFMSDSESKEQNSSPRTVLDALEGQSNSTEDDTFSTMVSSTCTTDTPKRRSKPQSPLRRIASFLGSPFRRKHSMSKNEKAQPLLKCFSYEQIANATNEFHQDNLVGRGGYSEVYKGDLCDGRSIAVKRLAKDNNDPNKEKEFLMELGVIGHVCHPNTASLVGCCVENGLYLVFNYSQNGNLATALHGKGGDSLDWPIRYKIAIGVARGLHYLHKCCKHRIIHRDIKASNVLLGPDYEPQITDFGLAKWLPNKWSHHAVIPVEGTFGYLAPEYFMHGIVDEKTDVFAFGVLLLEIVTGRRPVDSSSQNLLLWAKPLMESGNIGELADPKMDGKYDEEQLYRLVLTASYCVRQNATWRPPMSEVLELLASGNDCEAGKSWRIPKFTSDELDDYSMVFGYDVPSHISLEDFL 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g03237 604 MobiDBLite consensus disorder prediction 218 252 - -
Aip01g03237 604 Pfam Universal stress protein family 8 146 IPR006016 -
Aip01g03237 604 MobiDBLite consensus disorder prediction 155 173 - -
Aip01g03237 604 PANTHER OS08G0249100 PROTEIN 6 594 - -
Aip01g03237 604 Gene3D HUPs 4 148 IPR014729 -
Aip01g03237 604 Gene3D Phosphorylase Kinase; domain 1 257 370 - -
Aip01g03237 604 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 7 140 - -
Aip01g03237 604 SUPERFAMILY Protein kinase-like (PK-like) 268 561 IPR011009 -
Aip01g03237 604 CDD USP_Like 8 148 - -
Aip01g03237 604 MobiDBLite consensus disorder prediction 218 245 - -
Aip01g03237 604 ProSiteProfiles Protein kinase domain profile. 294 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g03237 604 Pfam Protein kinase domain 294 504 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g03237 604 SMART serkin_6 294 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g03237 604 ProSitePatterns Serine/Threonine protein kinases active-site signature. 415 427 IPR008271 GO:0004672|GO:0006468
Aip01g03237 604 MobiDBLite consensus disorder prediction 155 187 - -
Aip01g03237 604 Gene3D Transferase(Phosphotransferase) domain 1 372 573 - -
Aip01g03237 604 PANTHER OS08G0249100 PROTEIN 6 594 - -
Aip01g03237 604 ProSitePatterns Protein kinases ATP-binding region signature. 300 322 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g03237 Aip-Chr1 135533716 135536702 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g03237 282 593 Trihelix Transcription Factor Family AT1G70460 40.000 3.99e-74 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Aip01g03237 PK_Tyr_Ser-Thr 6.8e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g03237 - - ccaj:109809416 988.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g03237 01 135533716 135536702 Aip01g03237 01 135533716 135536702 ECH