Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g03194 ATGTTCGATCATTACTGCTCGCCCTTCATCTCTGATTTCTTCCAATTTGTCGGCGTTCTTCTGCTAGTATTCACCATTGGCAGTCACTATTCTGCAGGATGGAACTCAAGTGCAGCTAATGCCACTAAGTTCCAGAAATATCTCGCCGCAGAAAATGGAGGAGGAGCTGATCTTGTTGCCAACTGTACTTCAGCTTCAGCTTCAGGTTGGGAAACATTCAAGCTATGGAGGGTTAGTGACACATCCTTCAATTTTAGAGTGTTTAACAAGCAATTTCTTGGGATGGAAAATCAAGGTAGTGGAAGCATTATTGAAGCCCCACCTTCTAATAGAAGAACTCTAGATACCTTTGGCCAGAGAACTTCAATATACCGTGGCGTAACAAGACATAAATGGACTGGAAGATATAAAGGTCATCTTTGGGATAATAGCTACAGAAGGGAAGGACAATCAAGAAAAGGTAGCCAAGTGTATTTGGGTAAGAGTCTCTCTTTGATTCCTTCCTGTTATTATTATTGGGGGACATCCACTACTACCAACTTTCCTATCAGCAACTATGAGAAGGAATTGGATGAAATAAAACACATGACAAGACAAGAATTTGTAGTCGCCATAAGAAGATTTAGTATATGGGACAAGTCAAGCATGGATATAAAATATGCAAGTAGATTGACATCTTGTTGA 684 0.402 MFDHYCSPFISDFFQFVGVLLLVFTIGSHYSAGWNSSAANATKFQKYLAAENGGGADLVANCTSASASGWETFKLWRVSDTSFNFRVFNKQFLGMENQGSGSIIEAPPSNRRTLDTFGQRTSIYRGVTRHKWTGRYKGHLWDNSYRREGQSRKGSQVYLGKSLSLIPSCYYYWGTSTTTNFPISNYEKELDEIKHMTRQEFVVAIRRFSIWDKSSMDIKYASRLTSC 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g03194 227 Gene3D - 33 118 - -
Aip01g03194 227 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 100 209 - -
Aip01g03194 227 Gene3D AP2/ERF domain 123 162 IPR036955 GO:0003700|GO:0006355
Aip01g03194 227 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR PLT2 100 209 - -
Aip01g03194 227 SUPERFAMILY Actin-crosslinking proteins 45 100 IPR008999 -
Aip01g03194 227 SMART rav1_2 123 188 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g03194 Aip-Chr1 135039044 135042131 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g03194 3 209 AP2-EREBP Transcription Factor Family AT1G51190 45.946 3.26e-47 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g03194 K09285 - sly:101252050 167.933