Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g03185 ATGGGGTGGTCTCAAGTGATAACCTTGACAACTCTTGTTGTTGGGGCCATGGCCATTACTGTTACATGTTCTCCCTTTGTGCAGCAAAAGCTAGACAAGGTTGGAAAGCTACCAGGTCAATCTTTTGCTATCAAGTTCCAACACTATTCTGGCTATGTCACTGTTAACGAGGAAGCTGGAAGGGCCCTCTTTTACTGGTTCATGGAGGCTGATCAGGACCCTCAAACCAAACCCCTTCTCTTATGGCTCAATGGAGGGCCTGGATGTTCATCCATTGCTTTTGGTGAGGCAGAAGAAATTGGCCCCTTTCATATAAATCCAGATGGAAACACACTTTATCTGAATCCTTACTCTTGGAACCAAGTTGCCAACGTTCTTTTTCTTGATTCTCCTGTTGGAGTTGGATTTTCATATTCAAACACTTCATCTGACATTCTTAACAATGGCGACAAGAGGACTGCTGAGGACTCTCTAACATTCTTATTGAAGTGGTTTGAGCGTTTCCCCCAATATAAAGGAAGGGACTTCTTTATCGCCGGCGAGAGCTATGCAGGGCATTATGTTCCTCAACTTAGCCAAGCTATCTTGAAGTACAACTCGGAAACAAAGAAAAATGCTATAAATCTGAAAGGATACTTGGTTGGAAATGCTCTTACTGATGATTTCCATGACCATTTGGGGGTTGCTCAGTTTATGTGGGCAAGTGGTTTGATTTCTGATCAAACATACAAACTATTGAACCAATGTGATTCCGAGTCGTTCATACATCCCTCAAATTCTTGCAATCAGGCTTTTGAAAATGCCGATGTAGAGCTTGGCAATATTGACCCTTACAGTATCTTTACTTCTCTGTGCCCTGGTAATGTTAGCCAGACAAAGCAACTGCTAAGAAGAAAGCATAGATTTGGTAGACTCAATGAAGGGTATGATCCTTGCACTGAGAAGCACTCTACTGCTTACTTCAATCTACCTGAGGTCCAAAAGGCACTTCATGTTGATCAAGATCACAAGCCTAGTAAATGGGAAACCTGCAGTGAAACTATAAATATCAACTGGAAGGACTCTCCAAGTACGGTGCTCGATGTTTATCATGAACTTATTGGTTCAGGACTGAGGATATGGATGTTCAGTGGTGACACAGATTCAGTACTCCCGGTGACATCTACTCGGTATAGTATAGATGCTCTTAAGCTTCCGACAGTTAGCCCTTGGCGTCCATGGTACGACGAAGGGCAGGTGGGAGGGTGGACACAAGAATATGATGGACTCACCTTTGTGGCAGTAAGGGGAGCAGGACATGAAGTTCCTTTGCATAGACCAAAACTTGCTCTTTCACTCTTCAAAGCCTTCATAGCTGGAACCTCCATGCCCACTCTTCAGCTTGTCAGTGACTCCTAA 1398 0.4371 MGWSQVITLTTLVVGAMAITVTCSPFVQQKLDKVGKLPGQSFAIKFQHYSGYVTVNEEAGRALFYWFMEADQDPQTKPLLLWLNGGPGCSSIAFGEAEEIGPFHINPDGNTLYLNPYSWNQVANVLFLDSPVGVGFSYSNTSSDILNNGDKRTAEDSLTFLLKWFERFPQYKGRDFFIAGESYAGHYVPQLSQAILKYNSETKKNAINLKGYLVGNALTDDFHDHLGVAQFMWASGLISDQTYKLLNQCDSESFIHPSNSCNQAFENADVELGNIDPYSIFTSLCPGNVSQTKQLLRRKHRFGRLNEGYDPCTEKHSTAYFNLPEVQKALHVDQDHKPSKWETCSETININWKDSPSTVLDVYHELIGSGLRIWMFSGDTDSVLPVTSTRYSIDALKLPTVSPWRPWYDEGQVGGWTQEYDGLTFVAVRGAGHEVPLHRPKLALSLFKAFIAGTSMPTLQLVSDS 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g03185 465 Pfam Serine carboxypeptidase 38 452 IPR001563 GO:0004185|GO:0006508
Aip01g03185 465 SUPERFAMILY alpha/beta-Hydrolases 33 456 IPR029058 -
Aip01g03185 465 ProSitePatterns Serine carboxypeptidases, histidine active site. 423 440 IPR033124 GO:0004185
Aip01g03185 465 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 29 8 459 - -
Aip01g03185 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 115 127 IPR001563 GO:0004185|GO:0006508
Aip01g03185 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 128 138 IPR001563 GO:0004185|GO:0006508
Aip01g03185 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 164 189 IPR001563 GO:0004185|GO:0006508
Aip01g03185 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 423 436 IPR001563 GO:0004185|GO:0006508
Aip01g03185 465 Gene3D - 359 453 - -
Aip01g03185 465 Gene3D alpha/beta hydrolase 29 286 IPR029058 -
Aip01g03185 465 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 8 459 IPR001563 GO:0004185|GO:0006508
Aip01g03185 465 Gene3D - 312 350 - -
Aip01g03185 465 ProSitePatterns Serine carboxypeptidases, serine active site. 178 185 IPR018202 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g03185 Aip-Chr1 134966592 134969397 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g03185 322 456 Calmodulin-binding Proteins AT2G22960 27.206 3.99e-12 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g03185 K16297 - fve:101295740 738.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g03185 01 134966592 134969397 Aip01g03185 01 134966592 134969397 ECH