Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g03183 ATGATGTGTTTGTTAAGAGTTACAACAATGTTCCTATTTTTGTTTTTGGACATTGTTAACTCAAGAGTAGTTCATGGGGAACAAAATGCCCCCCTTGTGTATGATAAAAGTTCACTTGTTTCATTCATGTTATGCATTGTTTCTGACCCTGAAAATGCTCTAGAGAGTTGGAAGTCACCAAATGTTCATGTTTGTGATTGGTCAGGTGTGAAGTGCAACAATGCAAGTGATAGGATCATAGAGCTTGACCTTAGTGAAAGGTCATTGGGGGGAACCATTTCTCCTTCACTTGGAAACCTCTCTTCCTTGAAAATTCTTGATCTTTCAGGGAACTTTTTTGTGGGTCACATTCCAAAAGAGTTAGGCTATTTAATTCACCTAAGACAACTAAGTTTGTCTGGGAATTTTCTTGAAGGTGTCATTCCCTCAGAGTTTGGGTTCCTTCACAACTTGGACTACCTTGACATGGAAAGCAATAATCTTGATGGAGAAATTCCACCATCACTTTTCTGCAATGGAAGTTCACTAAGTTATATAGACCTCTCCAATAATTCTTTAGGGGGATTTATCCCTTTGAGCAATGAGTGTGTCCTTAAAGAACTTAGGTTCTTCTTACTTTGGTCTAATCATTTTGTTGGTCATGTTCCCTTATCTCTTTCAAACTCCACTCAACTTAAATGGCTTGATTTGGAGTCAAATATGTTAAGTGGAGAGCTTCCATCTGAGATAGTACACAATTGGCCACAATTACAGTTCCTGTACTTGTCATATAATGACTTTGTCAGCCATGATGGTAACGCCAACCTTGAACCTTTCTTTGCTTCCTTGATGAACTTGTCTAGATTTCAAGAACTCGAATTAGCGGGAAACCGCCTTGGTGGGAAGCTACCTCATATTATTGGTGATCTTCCTACTAGTATGCAACATCTTCACCTAGAAGGAAATCTCATATATGGTTCTATACCTCCACATATTTCCAACCTTGTCAACTTGACTTTCTTGAATTTGTCTAGTAATCAAATAAATGGATCAATCCCCTCTAGTTTCTGCCACATGATTAGGCTAGAGAGAATTTATTTGTCAAATAACTCATTACATGGTGAGATTCCATCAGAACTTAGTGATATCAAACACCTGGGCCTTCTAGATTTGTCAAGAAACAAGCTTTCAGGTTCAATACCAGATAGTTTTGCCAACCTTCCCCAGTTAAGAAGGCTTTTACTTTATGACAACCAGCTTTCTGGGAAAATTCCACCAAGTCTTGGAAAATGTGTCAATTTGGAGATTCTGGACTTGTCTCACAACAAGATTTCAGGCCAGATTCCTGCAGAAGTTGCAGCTTTGGCTAGCTTGAAACTATACTTGAATTTATCAAGCAATAACTTATATGGTCCAATTCCATTAGAACTCAGCAAAATGGATATGGTGCTAGCTATTGATCTTTCCATGAACAATCTATCAGGAAGAATCCCACCACAACTTGAAAGTTCCATAGCACTAGAGTACCTCAACCTCTCTGGTAACTCCTTAGAAGGCCCTATCCCTTATTCATTAGGCCAATTGCCTTATCTTGAAGCACTTGATGTGTCTTCAAACCAGTTGAGTGGAGTAATACCAGTGTCTCTGCAGCTATCTTCCACCCTCAAAGTACTCAATTTCTCTTTCAACAAATTCTCAGGAAATGTCTCAAACAAGGGAGCATTTTCATCTCTGACCATAGATTCTTTCCTGGGAAATGATGGTCTTTGTGGCACAGTAGTAGGCTTGGAAATCTGCCATAAGAAACACAGCTATCATTTGGTGTTCTTATTGATTCCTGTGTTACTATTTGCCACTCCTCTTCTGTGCATGTGTAGGTACTCCATGGTAATCAAGTCAAGAGTGAGAAAGCGATTCGCAGTTGTTAACAAGGGCAAGTTGAGGGATGAGGAAGAGGAAACAGAAGAGCTCCATTATCCAAAAATTTCATATGGAAATCTTAGAGAAGCCACAGGAGGTTTCAGTTCCTCGAGCTTAATCGGTTCAGGCCGGTTTGGACAGGTCTACAAAGGAGTCCTCTTAGATAACACAAGAGTAGCAGTGAAGGTATTAGATACAGAAACAGCTGGTGATATCTCATGGAGCTTTAAGAGGGAATGCCAAATCATTAGAAAGATTAGGCACAGAAACTTAATAAAGATCATCACAATTTGTAGTAAACCAGGATTTAAGGCTCTTGTGCTTCCTCTTATGCCAAATGGTAGTCTTGAGAGGCACTTATATCCAAGTCATGGGTTAAACCAAAGGTTGGATGTGGTTCAGTTAGTGAGGATATGCAGCGATGTAGCCGAGGGAATGTCCTATCTCCACCATTACTCACCAGTGAAAATCGCGCACTGCGATCTTAAGCCGAGTAATATACTTCTTGATGAAGATATGACAGCTTTGGTTACGGATTTTGGAATTGCAAAGCTTGTAAAAGGTGATGACAGTGCCTCCACAAGTTACTCAGCAGCATCTTTCAGCTCAACACAGGGCTTATTATGTGGCTCTGTTGGCTATATAGCTCCTGAATATGGCATGGGAAAACATGCTTCAACTCAAGGTGATGTTTACAGTTTTGGAGTGATTCTGTTAGAAATCGTCACGGGGAGACGCCCCACGGATGTACTCATGCATGAAGGATCAAGCTTGCATGAGTGGGTTAAGAGACAATACACAAACCAAGACAAGCTTGGCAAATTGGTTGAAGAAGCATTACAAAGATACTCTTCTTGTTTGCCAAGTCATCATAACAGAACAAGGCAAGATGTTATACTTGAACTTGTGGAGTTGGGACTTATCTGCACACAGCAGAATCCTTCAACAAGACCAACCATGATGGATGTAGCACAAGAGTTGGGAAGATTAAAGGACTACCTCACTAATCCAAATTCTTCATGCAGATCAGAAAATTCAGTCAAATAG 2946 0.4009 MMCLLRVTTMFLFLFLDIVNSRVVHGEQNAPLVYDKSSLVSFMLCIVSDPENALESWKSPNVHVCDWSGVKCNNASDRIIELDLSERSLGGTISPSLGNLSSLKILDLSGNFFVGHIPKELGYLIHLRQLSLSGNFLEGVIPSEFGFLHNLDYLDMESNNLDGEIPPSLFCNGSSLSYIDLSNNSLGGFIPLSNECVLKELRFFLLWSNHFVGHVPLSLSNSTQLKWLDLESNMLSGELPSEIVHNWPQLQFLYLSYNDFVSHDGNANLEPFFASLMNLSRFQELELAGNRLGGKLPHIIGDLPTSMQHLHLEGNLIYGSIPPHISNLVNLTFLNLSSNQINGSIPSSFCHMIRLERIYLSNNSLHGEIPSELSDIKHLGLLDLSRNKLSGSIPDSFANLPQLRRLLLYDNQLSGKIPPSLGKCVNLEILDLSHNKISGQIPAEVAALASLKLYLNLSSNNLYGPIPLELSKMDMVLAIDLSMNNLSGRIPPQLESSIALEYLNLSGNSLEGPIPYSLGQLPYLEALDVSSNQLSGVIPVSLQLSSTLKVLNFSFNKFSGNVSNKGAFSSLTIDSFLGNDGLCGTVVGLEICHKKHSYHLVFLLIPVLLFATPLLCMCRYSMVIKSRVRKRFAVVNKGKLRDEEEETEELHYPKISYGNLREATGGFSSSSLIGSGRFGQVYKGVLLDNTRVAVKVLDTETAGDISWSFKRECQIIRKIRHRNLIKIITICSKPGFKALVLPLMPNGSLERHLYPSHGLNQRLDVVQLVRICSDVAEGMSYLHHYSPVKIAHCDLKPSNILLDEDMTALVTDFGIAKLVKGDDSASTSYSAASFSSTQGLLCGSVGYIAPEYGMGKHASTQGDVYSFGVILLEIVTGRRPTDVLMHEGSSLHEWVKRQYTNQDKLGKLVEEALQRYSSCLPSHHNRTRQDVILELVELGLICTQQNPSTRPTMMDVAQELGRLKDYLTNPNSSCRSENSVK 981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g03183 981 PANTHER OS04G0122200 PROTEIN 27 964 - -
Aip01g03183 981 SUPERFAMILY RNI-like 79 366 - -
Aip01g03183 981 Gene3D Ribonuclease Inhibitor 197 266 IPR032675 -
Aip01g03183 981 Gene3D Phosphorylase Kinase; domain 1 629 742 - -
Aip01g03183 981 SUPERFAMILY Protein kinase-like (PK-like) 647 960 IPR011009 -
Aip01g03183 981 SUPERFAMILY L domain-like 275 576 - -
Aip01g03183 981 Gene3D Ribonuclease Inhibitor 267 368 IPR032675 -
Aip01g03183 981 Gene3D Ribonuclease Inhibitor 34 196 IPR032675 -
Aip01g03183 981 CDD STKc_IRAK 673 963 - -
Aip01g03183 981 Pfam Leucine rich repeat 354 413 IPR001611 GO:0005515
Aip01g03183 981 Pfam Leucine rich repeat 126 186 IPR001611 GO:0005515
Aip01g03183 981 ProSitePatterns Serine/Threonine protein kinases active-site signature. 790 802 IPR008271 GO:0004672|GO:0006468
Aip01g03183 981 SMART LRR_typ_2 100 122 IPR003591 -
Aip01g03183 981 SMART LRR_typ_2 425 448 IPR003591 -
Aip01g03183 981 SMART LRR_typ_2 352 375 IPR003591 -
Aip01g03183 981 SMART LRR_typ_2 328 351 IPR003591 -
Aip01g03183 981 SMART LRR_typ_2 400 424 IPR003591 -
Aip01g03183 981 SMART LRR_typ_2 124 147 IPR003591 -
Aip01g03183 981 SMART LRR_typ_2 521 544 IPR003591 -
Aip01g03183 981 SMART LRR_typ_2 376 399 IPR003591 -
Aip01g03183 981 SMART LRR_typ_2 148 172 IPR003591 -
Aip01g03183 981 Gene3D Ribonuclease Inhibitor 474 585 IPR032675 -
Aip01g03183 981 Pfam Leucine rich repeat N-terminal domain 34 73 IPR013210 -
Aip01g03183 981 ProSiteProfiles Leucine-rich repeat profile. 330 352 IPR001611 GO:0005515
Aip01g03183 981 Gene3D Ribonuclease Inhibitor 369 473 IPR032675 -
Aip01g03183 981 SMART serkin_6 667 967 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g03183 981 ProSiteProfiles Protein kinase domain profile. 667 967 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g03183 981 PANTHER LEUCINE-RICH RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN 27 964 - -
Aip01g03183 981 Pfam Leucine Rich repeat 424 439 IPR001611 GO:0005515
Aip01g03183 981 ProSitePatterns Protein kinases ATP-binding region signature. 673 695 IPR017441 GO:0005524
Aip01g03183 981 Pfam Protein kinase domain 669 958 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g03183 981 Pfam Leucine Rich Repeat 330 352 IPR001611 GO:0005515
Aip01g03183 981 Pfam Leucine Rich Repeat 500 519 IPR001611 GO:0005515
Aip01g03183 981 ProSiteProfiles Leucine-rich repeat profile. 426 448 IPR001611 GO:0005515
Aip01g03183 981 PRINTS Leucine-rich repeat signature 427 440 - -
Aip01g03183 981 PRINTS Leucine-rich repeat signature 521 534 - -
Aip01g03183 981 Gene3D Transferase(Phosphotransferase) domain 1 744 978 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g03183 Aip-Chr1 134949445 134952779 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g03183 35 965 Receptor kinase-like Gene Family AT3G47110 36.445 3.58e-157 488
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Aip01g03183 Pkinase 3.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g03183 - - lang:109346572 1479.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g03183 01 134949445 134952779 Aip01g03183 01 134949445 134952779 ECH