Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g03165 ATGATGAGGATGGCAGCAATGTTGTTCTATATGATGGTGTTTGCAACAATATGTTCATCATCATCATCCATGGCAATAACAAGAGAGCAAGAAGAAGATAGAATAAGAGAGCTTCCGGGTCAGCCACGTGTCGGATTCTCACAGTTCTCAGGATATGTAAGTGTAAACAAGAAACATGGTAGAGCACTCTTCTACTGGCTCACTCAGTCTCCCTCTTCTCCCAACAACAAACCTCTTCTTCTCTGGCTCAATGGAGGACCTGGTTGTTCATCAGTAGCATATGGGGCATCAGAGGAAATTGGACCATTCAGGATAAACAAAACTGGTTCTTCTTTATATCTTAACAGATTTGCTTGGAACACAGAAGCAAATATTCTGTTTCTTGAATCACCTGCTGGTGTTGGTTTTTCATACACAAATACCAGCTCTGATCTCCTAACTTCTGGGGACAATAGGACAGCTCAGGATGCACTGATTTTTCTAGTTAAATGGATGTCAAGATTCCCACAGTATAAATATAGGGACTTTTACATTGCTGGGGAGAGTTATGCAGAACATCCCAACATTATTAATCTCAAAGGGTTCATTGTGGGAAATGCTGTGACTGATAACTACTATGATAGCATTGGAACTGTGACATATTGGTGGAGCCATTCAATGATATCAGATCATTCATACAAATCTATCATCAAACATTGTGATTTCAAAGCACAGAACACTTCTCAAGAATGTAATGATGCTGTGAACTATGCAGTCAACAATGAATTTGGAAACATTGATCAATACAGTATCTATACTCCTACATGCCCAGCATCACAAAACAGCAATCTTAGGCGCATAAGGCTAAAGACTACAATGTTTCATATGATTTCTGGCTATGATCCTTGTACTGAAAATTATGCAGAGAAATATTATAATCTTCCTCAAGTGCAGAAAGCAATGCATGCAAATGTTACCAACATTCCTTACAAATGGACTGCTTGCAGTGATGTGCTCCTGAAAAATTGGAAGGATTCTGAATTTTCTATATTGCCCATATACAAAGAGTTAATTGCAGCTGGATTGAGAATATGGGTTTTCAGCGGGGACACAGATTCAGTGGTTCCAGTTACAGCCACAAGGTTTTCACTCAACCATCTCAACCTCACCATTAAAACTCCTTGGTATCCATGGTACTCATCAGGTGCACAGGTAGGTGGATGGACAGAGGTATATGATGGACTGACATTTGCAACAGTGAGAGGAGCTGGACATGAAGTACCTCTGTTTCAGCCAGAGAGAGCTCACATTCTTTTCAAGTCATTTTTGGCAGGGAAGAAGCTACCAAAGTCTTGA 1335 0.4015 MMRMAAMLFYMMVFATICSSSSSMAITREQEEDRIRELPGQPRVGFSQFSGYVSVNKKHGRALFYWLTQSPSSPNNKPLLLWLNGGPGCSSVAYGASEEIGPFRINKTGSSLYLNRFAWNTEANILFLESPAGVGFSYTNTSSDLLTSGDNRTAQDALIFLVKWMSRFPQYKYRDFYIAGESYAEHPNIINLKGFIVGNAVTDNYYDSIGTVTYWWSHSMISDHSYKSIIKHCDFKAQNTSQECNDAVNYAVNNEFGNIDQYSIYTPTCPASQNSNLRRIRLKTTMFHMISGYDPCTENYAEKYYNLPQVQKAMHANVTNIPYKWTACSDVLLKNWKDSEFSILPIYKELIAAGLRIWVFSGDTDSVVPVTATRFSLNHLNLTIKTPWYPWYSSGAQVGGWTEVYDGLTFATVRGAGHEVPLFQPERAHILFKSFLAGKKLPKS 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g03165 444 Gene3D alpha/beta hydrolase 29 271 IPR029058 -
Aip01g03165 444 Pfam Serine carboxypeptidase 40 437 IPR001563 GO:0004185|GO:0006508
Aip01g03165 444 SUPERFAMILY alpha/beta-Hydrolases 30 441 IPR029058 -
Aip01g03165 444 PRINTS Carboxypeptidase C serine protease (S10) family signature 115 127 IPR001563 GO:0004185|GO:0006508
Aip01g03165 444 PRINTS Carboxypeptidase C serine protease (S10) family signature 128 138 IPR001563 GO:0004185|GO:0006508
Aip01g03165 444 PRINTS Carboxypeptidase C serine protease (S10) family signature 164 189 IPR001563 GO:0004185|GO:0006508
Aip01g03165 444 PRINTS Carboxypeptidase C serine protease (S10) family signature 408 421 IPR001563 GO:0004185|GO:0006508
Aip01g03165 444 PANTHER SERINE CARBOXYPEPTIDASE 24 12 443 - -
Aip01g03165 444 Gene3D - 343 438 - -
Aip01g03165 444 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 12 443 IPR001563 GO:0004185|GO:0006508
Aip01g03165 444 Gene3D - 296 333 - -
Aip01g03165 444 ProSitePatterns Serine carboxypeptidases, histidine active site. 408 425 IPR033124 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g03165 Aip-Chr1 134820276 134825087 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g03165 287 441 Calmodulin-binding Proteins AT2G22960 28.846 1.54e-12 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g03165 K16297 - gmx:100783242 738.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g03165 01 134820276 134825087 Aip01g03165 01 134820276 134825087 ECH