Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g03148 ATGAAGATGATGAAGCATCCTCATATCGTTGCGCTCCACGAAGTAATGGCCTCCAAATCCAAGATCTACATCGCCATGGAGCTCGTCCGCGGCGGCGAGCTCTTCAACAAAATTGCCACAAGGGGACGCATGAGGGAGGACCTTGCGAGGCTCTACTTTCACCAGCTTATCTCCGCCGTCGATTTCTGCCACAGCCGTGGCGTCTACCACCGCGATCTCAAGCCGGAGAATCTCCTCCTTGACCACAACGGCAACCTCAAGGTCTCTGACTTCGGACTCAGCACTTTCTCCGAGCATCTCCGCCAGGACGGCTTATTGCACACAACTTGCGGCACTCCGGCATACGTCTCGCCGGAGGTGCTCGGGCGGAAGGGATACGACGGCGCCAAGGCCGATATATGGTCCTGCGGCGTCATCCTGTTTGTGCTTCTTGCAGGTTGCTTGCCTTTTCAGGACGATAACCTTGTTGCGATGTACAAGAAGATTTACAGAGGAGATTTCAAGTGTCCGCCGTGGTTCTCCGGCGATGCAAGGAGGCTCATCACCAAGCTGCTCGATCCGAATCCGAATTCTCGCATCACCATTTCGAAAATCATGGAGTCACCGTGGTTCAAGAAACCTGTTCCGAAGAACATGCTACGGGGGATGAAGGATGAAGATGAAGAGGAGAAGGAGAAAGACATAGAGGAGAAGATGAAGCAGCCATCGACGATGAACGCGTTTCACATAATATCGTTATCGGAAGGATTTGATTTGTCGAGGTTGTTCGAGGAGAAGAAGAGGGAGGAGAGGGAGGAGATGAGGTTTGCGACGGCGGGGACGGCGAGCAGCGTGATATCTCGACTGGAGGAGGTGGCGAAGGCGGTGAAGTTCGACGTGAAGAGGAGCAGCGATGAGACGAAGGTGAGGCTGCAGGGGCAGCAGAGAGGAAGGAAGGGGAAGCTGGCAATTGCGGCGGATATATACGCCGTGACGCCGTCGTTCCTGGTGGTGGAGGTGAAGAAAGACAACGGTGACACTTTGGAGTACAACCAGTTCTGCAGCAAGGAGCTTCGCCCTGCACTCAAGGATATCTTCTGGACTTCCCCACCTGAGAATACCACACCTGCTTAA 1113 0.5418 MKMMKHPHIVALHEVMASKSKIYIAMELVRGGELFNKIATRGRMREDLARLYFHQLISAVDFCHSRGVYHRDLKPENLLLDHNGNLKVSDFGLSTFSEHLRQDGLLHTTCGTPAYVSPEVLGRKGYDGAKADIWSCGVILFVLLAGCLPFQDDNLVAMYKKIYRGDFKCPPWFSGDARRLITKLLDPNPNSRITISKIMESPWFKKPVPKNMLRGMKDEDEEEKEKDIEEKMKQPSTMNAFHIISLSEGFDLSRLFEEKKREEREEMRFATAGTASSVISRLEEVAKAVKFDVKRSSDETKVRLQGQQRGRKGKLAIAADIYAVTPSFLVVEVKKDNGDTLEYNQFCSKELRPALKDIFWTSPPENTTPA 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g03148 370 PANTHER - 1 368 - -
Aip01g03148 370 Gene3D Transferase(Phosphotransferase) domain 1 34 209 - -
Aip01g03148 370 ProSitePatterns Serine/Threonine protein kinases active-site signature. 68 80 IPR008271 GO:0004672|GO:0006468
Aip01g03148 370 Pfam Protein kinase domain 1 204 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g03148 370 Gene3D Phosphorylase Kinase; domain 1 1 33 - -
Aip01g03148 370 ProSiteProfiles Protein kinase domain profile. 1 204 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g03148 370 Gene3D Kinase associated domain 1, KA1 232 361 - -
Aip01g03148 370 Pfam NAF domain 235 294 IPR004041 GO:0007165
Aip01g03148 370 SMART serkin_6 1 204 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g03148 370 ProSiteProfiles NAF domain profile. 233 257 IPR018451 GO:0007165
Aip01g03148 370 CDD CIPK_C 239 356 - -
Aip01g03148 370 SUPERFAMILY Protein kinase-like (PK-like) 1 205 IPR011009 -
Aip01g03148 370 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 1 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g03148 Aip-Chr1 134615793 134616905 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g03148 1 364 CBL-interacting serine-threonine protein kinases AT4G30960 72.283 0.0 541
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Aip01g03148 Pkinase 1.4e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g03148 - K07198 gmx:547644 597.816