Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g03127 ATGCTGCGGTGTTCTTGTACCACAAAAACTCCCATCTTCCTCTTCCTCTTTCTCATCTTCCACTTCCAGATTCTCTTCTACCAAGCACACTGTTGGATAAAAGCTGGTTACTGGTTTTACGGTTCTGAATTTCCCGTTTCTAACATAGAAACTTCTCTCTACACTCACCTCCTATGCGCTTTTGCTGATGTCAACGCTTCAACCTATGAACTTTCCATCCCTTCCGATGCTGCAGCATCATTTCCTTCTTTCACAGCCACTCTCAAGCACACCAATCCATCTCTCTCTACACTTCTTTCCATCGGTGGTGGTACTGCTGACTACACTGTCTTATCTTCCATGGTAAGCAATGCTTCTTCAAGAAAATCATTCATTCACTCTTCAATAACACTCGCTAGAACCTATGGCTTCCAAGGCCTTGATCTTTCATGGGTTTCTGCTAACACTACCAATGACTTGAAAAACATGGGACTGCTCTTTCAAGAGTGGAGAGAAGCTGCAAAATCTGAGGCAATAAACTCCACCAACAATAATAATCAAGAACTTATTTTAACTGCGGCTGTTCCATATCAACCAGGTTCTGATTTTGGTTCTTACCCTGTGGAGTCTATTAGTGATAACTTGAATTGGGTAAATGTTTTGGATTATGATTACTACACACCTCAATCAACAAATTTTACTGGAGCTCATTCAGCCTTGTATGATCCTTCTAGTGATGTCAACACAGACACCGGAATCAAGCGATGGATAGATAGTGGGGTATCTGCTAGTAAGTTGGTTTTGTCGTTACCATTCTATGGATATGCATGGAAGCTTAGGAACCAAAGGGAGAATGGAATAGGTGCAGCAGCAACAGGTCCAGCAATCACAAAAGGAGGAGACATGACCTACAAGGAAATCAAGGATTATGTTCAAAGATATGAAGCAACTGTGTTGTATAATGCTACTTACGTGGTCAATTATTTTTCAATTGGGTCAAATTGGATAGGATTTGATGATGCCGATGCTGTTAAAACCAAGGTGTCTTATGCTAAAGAAAAGAAACTAGGTGGTTATGTTGTATGGCAAGTTCCCTATGATGATGACAAATGGCAACTTTCTAGTGCTGCAGCTCAACAGGTGGTTGGCGGCGGAGAACACCATAATTGGCGGTTACCGGTGGTGATCACTTTGACAAGTGTTGTATGTATTATTCTGTTGGGTTTCATAATTTACTACATAAGAAGGAGACTAGTAAAACCAAAGGGAATCATAATTGCGGCTAGAGATGCAGGACATTTTCCTGATTGTGTTCCTGATGTGCAAGTCTTTAGCTTATGTGATATTGAGTTAGCCACTGATAGATTTTCGATTGAAAACAAGCTTGGTCAGGGTGGCTATGGTCCTGTTTACAAGGGAATATTACCAGATGGCAGGGAAATAGCAGTGAAGAAGTTATCAAAGACTTCAACACAAGGGTTTGAAGAATTCAAGAATGAGGTAACACTCACTGCAAGACTACAGCATGTGAATCTTGTTCAGTTGTTGGGATTCTACATTGATAGAGAAGAACAGATGCTGGTGTATGAGTACATGCCAAACAAAAGCCTTGACTACTATCTATTTGACCCTATCAGGCGGCTTCTTCTGGATTGGAGCAAGCGTGTAGCTATTATTGAGGGTGTTACTCAGGGACTACTTTATCTACAAGAATATTCGAGATTAACAATAATTCATAGAGATATAAAAGCTAGCAACATTCTGTTAGATGGTGAGATGAAACCAAAGATTTCAGATTTTGGTATGGCAAGAATATTCTCAAAAGATGAGCAAGAAGCAAACACGGCTAAGATTGTTGGAACATATGGTTATGTCTCTCCTGAATACCTTAAAAAAGGCTTGTATTCAGTAAAATCCGATGTGTATAGCTTTGGAGTTCTACTTCTGCAGATTATAGGTGGCAAAGTAACAAGATATTATGGCGAGCACGAAAACTTAACCTTGATGGAATATGCTTATGAATTGTGGAAAGAAGGAAGAGGCATGGAGTTTGCGGATCCTTTTCTTGATGACACAGCTTCAGGCTGCAAAATATTGAGGTGCATACAAATAGGTCTATTATGTGTGCAAGAAGATGCCAATGACAGGCCTTCTGTGTTGGAAATTTCTTCTATGTTAAGAAGTGAAACTGTTCTTGCTACACCAAAGAAGCCAGCGTTTTCAAGAGAAAAAGACATGCAGGAGCACGGTGAATTTGTTATGAAGCAAGAACATTATTCGGTTAACGAAGCAACAATGTCTCAGATTGTAGCAAGATAG 2298 0.4012 MLRCSCTTKTPIFLFLFLIFHFQILFYQAHCWIKAGYWFYGSEFPVSNIETSLYTHLLCAFADVNASTYELSIPSDAAASFPSFTATLKHTNPSLSTLLSIGGGTADYTVLSSMVSNASSRKSFIHSSITLARTYGFQGLDLSWVSANTTNDLKNMGLLFQEWREAAKSEAINSTNNNNQELILTAAVPYQPGSDFGSYPVESISDNLNWVNVLDYDYYTPQSTNFTGAHSALYDPSSDVNTDTGIKRWIDSGVSASKLVLSLPFYGYAWKLRNQRENGIGAAATGPAITKGGDMTYKEIKDYVQRYEATVLYNATYVVNYFSIGSNWIGFDDADAVKTKVSYAKEKKLGGYVVWQVPYDDDKWQLSSAAAQQVVGGGEHHNWRLPVVITLTSVVCIILLGFIIYYIRRRLVKPKGIIIAARDAGHFPDCVPDVQVFSLCDIELATDRFSIENKLGQGGYGPVYKGILPDGREIAVKKLSKTSTQGFEEFKNEVTLTARLQHVNLVQLLGFYIDREEQMLVYEYMPNKSLDYYLFDPIRRLLLDWSKRVAIIEGVTQGLLYLQEYSRLTIIHRDIKASNILLDGEMKPKISDFGMARIFSKDEQEANTAKIVGTYGYVSPEYLKKGLYSVKSDVYSFGVLLLQIIGGKVTRYYGEHENLTLMEYAYELWKEGRGMEFADPFLDDTASGCKILRCIQIGLLCVQEDANDRPSVLEISSMLRSETVLATPKKPAFSREKDMQEHGEFVMKQEHYSVNEATMSQIVAR 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g03127 765 SUPERFAMILY Chitinase insertion domain 266 331 IPR029070 -
Aip01g03127 765 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 32 377 IPR001223 GO:0005975
Aip01g03127 765 CDD GH18_plant_chitinase_class_V 32 366 - -
Aip01g03127 765 SUPERFAMILY Protein kinase-like (PK-like) 431 725 IPR011009 -
Aip01g03127 765 Gene3D - 265 331 IPR029070 -
Aip01g03127 765 ProSitePatterns Serine/Threonine protein kinases active-site signature. 570 582 IPR008271 GO:0004672|GO:0006468
Aip01g03127 765 Pfam Protein kinase domain 450 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g03127 765 Gene3D Glycosidases 46 361 - -
Aip01g03127 765 Pfam Glycosyl hydrolases family 18 35 360 IPR001223 GO:0005975
Aip01g03127 765 SMART serkin_6 449 724 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g03127 765 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 19 26 761 - -
Aip01g03127 765 SMART 2g34 32 360 IPR011583 GO:0008061
Aip01g03127 765 CDD STKc_IRAK 455 719 - -
Aip01g03127 765 Gene3D Phosphorylase Kinase; domain 1 426 524 - -
Aip01g03127 765 SUPERFAMILY (Trans)glycosidases 35 378 IPR017853 -
Aip01g03127 765 ProSiteProfiles Protein kinase domain profile. 449 725 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g03127 765 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 26 761 - -
Aip01g03127 765 Gene3D Transferase(Phosphotransferase) domain 1 525 738 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g03127 Aip-Chr1 134431960 134435188 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g03127 385 733 Receptor kinase-like Gene Family AT4G05200 51.124 1.65e-110 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip01g03127 Glyco_hydro_18 7.5e-66 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g03127 - - gmx:100787480 1012.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g03127 01 134431960 134435188 Aip01g03127 01 134431960 134435188 ECH