Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g03125 ATGGCTTCAACATCAATGCTTAGTTGCTTCTTCTTACTCTTCTTCCTTCCTCTCACTGCTGCACACACTGCATCATCATCGACATGGGTCAAAGCTGGTTATTACAATTCTGCCAGTGAAATCTCCGCTTCAGACATCAAATCCACACTCTTCACTCACCTCTTATGCGCTTTTTCTTTCATTAACTGGACCAACTATAACATCTTCATCAACGCTTCTGAACTTCACAAGTTCTCAGCCTTCACCCAAACAGTTAAGTCCCAAAACCCAACCGTTTCAACGCTTCTATCCATCTGGGCTGGTGGCAGAGACAACACTTTTCTTTTCTCAATGCTAAACCAATCTTCTCATAGAAAATCCTTCATTCATTCTTCTATTACAACAGCAAGGTCACATGGTTTTCAAGGCATAGATCTTATTGGAGCATCCCCAGTACCGGCTTCGGAGCTTGCCGATTTCGGGAAACTTCTGGAGGAGTGGCGAGCTGCCATAACTTCTGAGGCAAGAAACTCCAGTAAACCAGAGTTACTGTTAGTGATGGCGGGTTACTACCTTAGAGCTTCAGATTCAACGAGTTACCCTTTTGATTCAATGCAGAGGAACTTGGATTGGGTGCATTTTCTGGCATATGATTACTATGTTCCTACAAAGAACAATATCACGGGTTTTCATGCAGCTTTGTATGGTCCAACGAATTGGGACAACACTGATTCTGGTATCAAAGAATGGAGAAGAAGGGGATTCTCATCTAACAAGCTTGTAATTGGGTTGCCTTATCATGGATATGCATGGACACTTGTGAATCAAGGGGAGAATTGCATCGCGGCACCAGCATCGGGACCTGCCACTACAAGGGACGGTTCTATGGGTTATAAGTTTATAAAGAGTTTTCTTAGAAGCTTCGGGAATAATGGAGTTGTTTCAAGATTTAATAACAATTTTGTGGTGGATGAGTTCACAGTTGCAGCCACCGTTTGGGTTGATTTTGATGATGTGGATTCAATCAGAGCCAAAGTTTCTTATGCCAAGGAAAAGGGACTTCTTGGCTACAATGTGTTCCAACTTGCCAACGATGACAATTGGGTCCTTTCAAAGGCAGCTCAAGAAGTAGATGAAGATCATCATAAGAGGAGGTTGTTGATAATTGTTCTGCTATCAACAGTAACTGTCATAATTCTGTTGGGAATAGTGTTTTGCTACTGCCACAGAGGAACCGCAGCCACCATTACAAAAGCATTATACAAAATAAGGAAATGTTTATCAGGAGCTGAACAAGATCATGTAGAAGGGAATGGTTCTGACTTGACTGCATTCAGTTATCTCACAATCAAAATGGCAACAAATAACTTCTCAAGAGATCATAAACTTGGAGAGGGTGGATTTGGCACGGTTTATAAGGGAAAATTACCAAAGGGGCAGGAGATAGCTGTGAAAAGGCTCTCAGAAAGCTCGAATCAAGGCCTAGAAGAGTTCAAAAATGAAATCGCGCTTACGGCAAGATTACAACATGTGAATTTGGTTAGACTTCTGGGTTACTGCACAAAAAGGGATGAGAAGATTTTGATCTATGAATACCTACCAAACAAAAGCTTAGATCATTTTCTCTTTGATCCAAGGAAATCAATTCTTTTAGACTGGAGCAAGCGTGCCAACATCATTGAAGGGGTTACTCAAGGCCTTCTTTATCTCCAAGAGTACTCAAATTTCACCATAATCCACCGAGATCTCAAAGCCAGTAATATTTTATTAGACCATAATATGAATCCCAAGATATCAGATTTTGGCATGGCAAGAATTTTCAGGAAATATGACCTTGAAGCAAACACAAGCAGGATTGTTGGGACATACGGTTATGTACCTCCTGAGTATGTGAGAAAAGGCATATACTCGACGAAGTACGATGTTTATAGCTTTGGAGTTCTTCTGTTGCAAATCATAAGTGGGAAGAGGACTTCATGTTACTATGGACCACATGAAAATATGAACCTGTTGGAATATGCATATGAGCTGTGGATGGAGGGAAGAGGTGTGGAATTTTTAGACCCTTCATTAGATGATACAACATCAGCATGTAAACTCATGAGATGCATGCAAGTAGCTCTTTTGTGTGTTCAAGAGAACTCTGCAGATAGACCTTCCATGTTGGAAGTTGATTCAATTCTCAAGAATGAAACTGCAGCTATTGGTAGTCCCAAAATGCCTGGTTTTTCAGTGAAGAAACATGAAGATGATGAGAAAGAAAGATCCATAAAATATGTTTCAATTAATGATGTTACAATTTCTCAAATGATACCAAGATGA 2301 0.4046 MASTSMLSCFFLLFFLPLTAAHTASSSTWVKAGYYNSASEISASDIKSTLFTHLLCAFSFINWTNYNIFINASELHKFSAFTQTVKSQNPTVSTLLSIWAGGRDNTFLFSMLNQSSHRKSFIHSSITTARSHGFQGIDLIGASPVPASELADFGKLLEEWRAAITSEARNSSKPELLLVMAGYYLRASDSTSYPFDSMQRNLDWVHFLAYDYYVPTKNNITGFHAALYGPTNWDNTDSGIKEWRRRGFSSNKLVIGLPYHGYAWTLVNQGENCIAAPASGPATTRDGSMGYKFIKSFLRSFGNNGVVSRFNNNFVVDEFTVAATVWVDFDDVDSIRAKVSYAKEKGLLGYNVFQLANDDNWVLSKAAQEVDEDHHKRRLLIIVLLSTVTVIILLGIVFCYCHRGTAATITKALYKIRKCLSGAEQDHVEGNGSDLTAFSYLTIKMATNNFSRDHKLGEGGFGTVYKGKLPKGQEIAVKRLSESSNQGLEEFKNEIALTARLQHVNLVRLLGYCTKRDEKILIYEYLPNKSLDHFLFDPRKSILLDWSKRANIIEGVTQGLLYLQEYSNFTIIHRDLKASNILLDHNMNPKISDFGMARIFRKYDLEANTSRIVGTYGYVPPEYVRKGIYSTKYDVYSFGVLLLQIISGKRTSCYYGPHENMNLLEYAYELWMEGRGVEFLDPSLDDTTSACKLMRCMQVALLCVQENSADRPSMLEVDSILKNETAAIGSPKMPGFSVKKHEDDEKERSIKYVSINDVTISQMIPR 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g03125 766 SMART 2g34 29 358 IPR011583 GO:0008061
Aip01g03125 766 Pfam Glycosyl hydrolases family 18 32 358 IPR001223 GO:0005975
Aip01g03125 766 Gene3D Transferase(Phosphotransferase) domain 1 526 730 - -
Aip01g03125 766 CDD STKc_IRAK 456 723 - -
Aip01g03125 766 SUPERFAMILY Protein kinase-like (PK-like) 434 731 IPR011009 -
Aip01g03125 766 Gene3D Phosphorylase Kinase; domain 1 412 525 - -
Aip01g03125 766 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 14 762 - -
Aip01g03125 766 ProSitePatterns Protein kinases ATP-binding region signature. 456 478 IPR017441 GO:0005524
Aip01g03125 766 Gene3D - 259 329 IPR029070 -
Aip01g03125 766 ProSiteProfiles Protein kinase domain profile. 450 721 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g03125 766 Pfam Protein kinase domain 451 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g03125 766 ProSitePatterns Serine/Threonine protein kinases active-site signature. 571 583 IPR008271 GO:0004672|GO:0006468
Aip01g03125 766 SUPERFAMILY (Trans)glycosidases 32 359 IPR017853 -
Aip01g03125 766 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 14 762 - -
Aip01g03125 766 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 29 374 IPR001223 GO:0005975
Aip01g03125 766 Gene3D Glycosidases 44 360 - -
Aip01g03125 766 SMART serkin_6 450 726 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g03125 Aip-Chr1 134417292 134420496 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g03125 438 766 Receptor kinase-like Gene Family AT4G11480 50.147 2.69e-115 361
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip01g03125 Glyco_hydro_18 6.1e-53 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g03125 - - aprc:113847882 1146.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g03125 01 134417292 134420496 Aip01g03125 01 134417292 134420496 ECH