Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g03108 ATGGCGTTTGATCAAAATTCCGTAACAAAAGATCTGCGTCCGCTGAATGTAGCTACGAACTTGGCTATGGCGGAGGAGCACTTCGTTTCACCGCCGACCACCGCCACAGCCACCACACCTCCCACCCCCAATTCGGGTCGTGAAATGGGAAGCCCCGGCACGCCGCAGGTACCTCTTTTCTACTCACCTACAGTCTCTGACGGCGCCACCCTCGTTGGATTGAGCTACGGGAATGTGCCCTCCACCGCTGGCACTACGTGGTGTTTACGTCCCGCCATGTCCATTGCCCATCCCAATGCGAACCCTGCCATTGGGTATAATTATGGTCATAGTTGTTGTAATAGGGTTGCACCTGGCAATGCTACTTTGAATTTGGGGAACTGGGTGGGGACTAATGGCGCAATGGATAAGGCTTGTAATGATGCTGGTAATGGTTTTCCTGCCTACGGTGGTCTTAGGATTAACAGGGTCGTTGCCAACGCCACTGATCAGGCTACTTATGGCCATACTGCTGGCCACCGGGCTGATCATGTTGTTGAGGATGGTGGCGGTAGTGGTGGCGGCGTCGATGAATCTGTTTCTGGGAGGAAAGTGAAGTTCTTGTGCAGCTTTGGCGGGAGGATTTTGCCGAGGCCTAGTGATGGCATGTTGAGATATGTTGGAGGGAAGACTAGGATTATTAGTGTTAGGAGAGATGTGAGATTCAATGATTTGATGCAGAAGATGGTTGATACTTATGGGCAGCCTGTGGTTATAAAGTATCAGCTCCCTGAGGAGGAGCTTGATGCACTGGTCTCAGTTTCGTGCCCCGATGATGTTGAGCATATGATGGAGGAGTATGAAAAGTTGATGGAGAGGTCCCCTGACGGCTCTGCTAAATTGAGGGTTTTCCTTTTTTCTGCTGCTGATCTTGAAATCTCCGGCGGGATGCACTTTGCAGACTTGCAGGATAGTGGTCAGAGATATGTCGAGGCCGTGAATGGAATTGCAGATGATGTTAGTATTGGAATCACTAGGAAGGAGAGCGTTACAAGTGCAGCATCAACTCAGAATTCTGATTTGAGTGGCTCGGAGACCCTTGATAGTTTAATTTCTGGTGATGTAAGTGCAGTGCCTAAGGGAAATGTAGCAGCTTCTTCTGACACTCCTTCAAATTTGATGGCTTCTGATGCCAGTGGAGCTTCTGCAGTTTTGATGGGCATGTCGGCTGCTAGGACTCCAACCCACGCACCATATTTCCATAATGAGGTCGACCTAGAGAGGTCTATACCTGCTACAATGTCTCAGCAGCCAGTTGGGTTGCAGCAAAGTGGAATGGAAGTTCCATATTCTTCACCTTATTTACAGCCCTTTTTTGATTTGCGCCAGGAAGTTATGAATTATGCAGATTATGTCCAGATGCCTCCACAGACAGGGTTTCGAAATGCTCAGCTTCTAGGGAAGACAGGGCAAGTCTTCACTCAACCACAGTTTCATGATAACAATCCAGGTTCAGCATCTCATCAGGTCATTCCTGGCATGCAAATGACATTTACTCAACAAGGCATGCCTTCTCATGTTGGTGTGAGGTCAAATGTCGTCCAACCACAACCTGTGATGCAACTGCAGCAAAATCGTTCAGAGCAGTATAATGATGAAAATACATCAGGGATGAGAATTTTCCAGCTTCCCACTGAGCAAGGCTACAACACTTACCAGGTTCCAATGAATCGAGTCCCTTCTGTCATCGTTGGAGGTAATTATGGCTGGGTTCAGGTTCCTTCACAAGATCAAGTTGTTTACTCTGATGGGTTATTACCCCAACAACAGGTGATGGTCCCTGAGAAAAGCCAAAGAGTGGAGGACTGTTCATTATGCCAAACAAAACTGCCTCATGCACATTCCGATTCAGTGGTTCAAGATCAACGTATTAATGGTGCAGGATCAATTCCTGATTCAGTCCCAGCTTATCATAGTCTCCCCATGGAGGACAACTCAAGAGCTCAAGCTACAAACAATGTTATGTCGAGGGAAGGTATTGCTGAACAAGTGTCCCAGGCCAAACCACAGGTTATTAGAAAACCAGAGTCCCCAGATGGACTAACTTGTACTGAAAAAACTGCACCTCCTCAAAATCTTGAGCCACAACCTGAGGGAGTTAGGATTTTTACGCAAAAGCTAGATGGTTCTGATTATCCCAGAAATTCAACTATGTACGAAACCATTGGAAGGACAGGGGGGAAACAATCTCCAACACTGTCTCCAATTGATGGGCTCATGGGAAGTTCCCCACTATCTTATATTGATGATGTTGCCCACCGGCATATGTCTCCAGTTGAACACTCGGGTAAACAGGATGTGCTTGTGAATAAAACTGGCCATAACAATATTTCTACAGTTGATGGGACAGCTACACAAACTTCAGAATGCATGGCCCAAGGATCTCCAAAAGAATATACTACTGAGCTTTCTGGTGTTGTACCAAAGTCAGAGTTGGTGGATAAGATTACACAGGACCATCTGAAACCTATTGATGGGAGGATGGACACCCTCAACGTATGCATTCCTGAAGTTCATGTGAGTAATGATCGCTGCTTTCAGCCGGTTGATAAATCTAGCGGGATTGCTAGGGTTCCTAGTATGCTGCCTTCTTCTACAGAAATTTTGTATGCCCATAATTCTAGGCCAGGGGAATACAATGAGGATGAAACAACTTCATCAATATCACAATCTGTAAGGTTTGGAGATATTCAGGATTCGACAAACTCACTTTTCAGCAATCAAGATCCTTGGAATATACAGCATGGTACCTTCTTTCCAATTGCTAGACCTAACAAAGCTGTTTTGAAGAAAGAAACCTATTCTCATGGGCATGACTTTGGTGAGTTTCCAGGCAACTCTGGCGAACAAAATTTAGGAGCACAATTTGATGATGGCCTCTACCAGTCTTTGAAACAGCATTTACCTTTAGAACATGTTCGATCTGCCAAAGCTGTTGCTGAAGATGTAGCAGCTTCTGTTCTGCACTCAAGAATTCCTTCAAATCCTGACTTGCATGCAAGGGACAATATGTACCTTGAAAACACAGAGGATGGTGAAGATAAAAACAATCTGATAGATGTTGCTGAAACTCAGAGCATCAAGAGCAAGCAACCAGAAACGACAAATTTTGGCTTTCCAGCATCAGATGTTGGAGGATTGCAGGTAATAAAGAACTGTGACCTTGAAGAGCTTACAGAACTAGGATCTGGTACATTTGGGACTGTGTATCATGGAAAATGGAGAGGCACTGATGTTGCAATCAAGCGGATTACTGATAGGTGTTTTGCAGGAAAGCCTTCAGAGCAAGAGCGAATGAGAGCTGACTTCTGGAATGAGGCAATCAAGCTTGCTGACTTGCACCACCCAAATGTGGTGGCATTCTATGGTGTTGTCCTTGATGGCCCAGGAGGTTCTGTGGCAACAGTAACTGAATATATGGTTAATGGTTCTCTAAGAACTGCCTTGCTGAAGAATGGGAGGAACCTTGACAAGCGCAAGCGACTCTTGATTGCAATGGATGTGGCCTTTGGTATGGAGTACCTGCATGGAAAAAACATAGTTCACTTTGACTTGAAAAGTGACAACTTGCTTGTGAATCTCCGAGATCCCCACCGCCCAATATGCAAGGTTGGTGACTTGGGTCTTTCCAAAGTGAAGCGTCAGACGCTGATCTCTGGTGGTGTGAGAGGAACTCTACCTTGGATGGCTCCGGAGCTGCTGAATGGGAGCAGTAGCCTTGTTTCGGAGAAGGTTGATGTTTTCTCATTTGGTATTGTGATGTGGGAACTCTTAACTGGAGAAGAGCCATACGCTGATTTGCATTATGGTGCCATTATAGGTGGTATTGTGAGCAACACTTTGCGCCCTCCAGTTCCGGAATCTTGCGATTCAAAATGGAGGTTGCTGATGGAGACTTGCTGGTCCTCAGAACCATCGGAGAGACCTAGCTTCACTGAGATTGCCAATGAATTGCGATCCATGGCGACCAAGATCACTGCCAAAGGTCAAACCCAACAGCAGCAGCAACCCTCTTCCTTGCAGAGCCAAGTGCAGAAATGA 4080 0.4615 MAFDQNSVTKDLRPLNVATNLAMAEEHFVSPPTTATATTPPTPNSGREMGSPGTPQVPLFYSPTVSDGATLVGLSYGNVPSTAGTTWCLRPAMSIAHPNANPAIGYNYGHSCCNRVAPGNATLNLGNWVGTNGAMDKACNDAGNGFPAYGGLRINRVVANATDQATYGHTAGHRADHVVEDGGGSGGGVDESVSGRKVKFLCSFGGRILPRPSDGMLRYVGGKTRIISVRRDVRFNDLMQKMVDTYGQPVVIKYQLPEEELDALVSVSCPDDVEHMMEEYEKLMERSPDGSAKLRVFLFSAADLEISGGMHFADLQDSGQRYVEAVNGIADDVSIGITRKESVTSAASTQNSDLSGSETLDSLISGDVSAVPKGNVAASSDTPSNLMASDASGASAVLMGMSAARTPTHAPYFHNEVDLERSIPATMSQQPVGLQQSGMEVPYSSPYLQPFFDLRQEVMNYADYVQMPPQTGFRNAQLLGKTGQVFTQPQFHDNNPGSASHQVIPGMQMTFTQQGMPSHVGVRSNVVQPQPVMQLQQNRSEQYNDENTSGMRIFQLPTEQGYNTYQVPMNRVPSVIVGGNYGWVQVPSQDQVVYSDGLLPQQQVMVPEKSQRVEDCSLCQTKLPHAHSDSVVQDQRINGAGSIPDSVPAYHSLPMEDNSRAQATNNVMSREGIAEQVSQAKPQVIRKPESPDGLTCTEKTAPPQNLEPQPEGVRIFTQKLDGSDYPRNSTMYETIGRTGGKQSPTLSPIDGLMGSSPLSYIDDVAHRHMSPVEHSGKQDVLVNKTGHNNISTVDGTATQTSECMAQGSPKEYTTELSGVVPKSELVDKITQDHLKPIDGRMDTLNVCIPEVHVSNDRCFQPVDKSSGIARVPSMLPSSTEILYAHNSRPGEYNEDETTSSISQSVRFGDIQDSTNSLFSNQDPWNIQHGTFFPIARPNKAVLKKETYSHGHDFGEFPGNSGEQNLGAQFDDGLYQSLKQHLPLEHVRSAKAVAEDVAASVLHSRIPSNPDLHARDNMYLENTEDGEDKNNLIDVAETQSIKSKQPETTNFGFPASDVGGLQVIKNCDLEELTELGSGTFGTVYHGKWRGTDVAIKRITDRCFAGKPSEQERMRADFWNEAIKLADLHHPNVVAFYGVVLDGPGGSVATVTEYMVNGSLRTALLKNGRNLDKRKRLLIAMDVAFGMEYLHGKNIVHFDLKSDNLLVNLRDPHRPICKVGDLGLSKVKRQTLISGGVRGTLPWMAPELLNGSSSLVSEKVDVFSFGIVMWELLTGEEPYADLHYGAIIGGIVSNTLRPPVPESCDSKWRLLMETCWSSEPSERPSFTEIANELRSMATKITAKGQTQQQQQPSSLQSQVQK 1359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g03108 1359 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 900 1338 - -
Aip01g03108 1359 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 171 868 - -
Aip01g03108 1359 PRINTS Tyrosine kinase catalytic domain signature 1187 1205 IPR001245 GO:0004672|GO:0006468
Aip01g03108 1359 PRINTS Tyrosine kinase catalytic domain signature 1150 1163 IPR001245 GO:0004672|GO:0006468
Aip01g03108 1359 PRINTS Tyrosine kinase catalytic domain signature 1258 1280 IPR001245 GO:0004672|GO:0006468
Aip01g03108 1359 PRINTS Tyrosine kinase catalytic domain signature 1302 1324 IPR001245 GO:0004672|GO:0006468
Aip01g03108 1359 MobiDBLite consensus disorder prediction 31 56 - -
Aip01g03108 1359 Gene3D Transferase(Phosphotransferase) domain 1 1156 1359 - -
Aip01g03108 1359 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1193 1205 IPR008271 GO:0004672|GO:0006468
Aip01g03108 1359 PANTHER SERINE-THREONINE PROTEIN KINASE 900 1338 - -
Aip01g03108 1359 PANTHER SERINE-THREONINE PROTEIN KINASE 171 868 - -
Aip01g03108 1359 MobiDBLite consensus disorder prediction 686 709 - -
Aip01g03108 1359 ProSitePatterns Protein kinases ATP-binding region signature. 1074 1105 IPR017441 GO:0005524
Aip01g03108 1359 CDD STKc_MAP3K-like 1074 1331 - -
Aip01g03108 1359 Pfam Protein tyrosine and serine/threonine kinase 1071 1331 IPR001245 GO:0004672|GO:0006468
Aip01g03108 1359 MobiDBLite consensus disorder prediction 27 56 - -
Aip01g03108 1359 Pfam PB1 domain 217 300 IPR000270 GO:0005515
Aip01g03108 1359 Gene3D Phosphorylase Kinase; domain 1 1061 1155 - -
Aip01g03108 1359 CDD PB1_UP2 201 299 - -
Aip01g03108 1359 SMART serkin_6 1068 1339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g03108 1359 MobiDBLite consensus disorder prediction 1336 1359 - -
Aip01g03108 1359 ProSiteProfiles Protein kinase domain profile. 1068 1335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g03108 1359 SUPERFAMILY CAD & PB1 domains 213 303 - -
Aip01g03108 1359 MobiDBLite consensus disorder prediction 169 190 - -
Aip01g03108 1359 SUPERFAMILY Protein kinase-like (PK-like) 1062 1330 IPR011009 -
Aip01g03108 1359 SMART PB1_new 212 301 IPR000270 GO:0005515
Aip01g03108 1359 Gene3D - 218 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g03108 Aip-Chr1 134251903 134257813 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g03108 196 673 MAP Kinase Kinase Kinase AT3G46920 39.228 2.26e-83 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Aip01g03108 PK_Tyr_Ser-Thr 5.3e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g03108 - - gmx:100819234 1513.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g03108 01 134251903 134257813 Aip01g03108 01 134251903 134257813 ECH
Aip01g03108 01 134251903 134257813 Aip03g02895 03 79686235 79692349 PCT