Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g03106 ATGTACTTGATCATAATGAACATCCTTCTCTGGGTTTGTTTCCTTTCTCTATTCCTCTTCCTATTCCTCTTGTTCCGTCACGTGTTTCCATTTATCGCTCCGAAATTACCACCAGGGACAATGGGGTACCCCATTATGGGGGAGACCTTGGAGTTCTTGTCGACCGGGTGGAAAGGAGAGCCGGAGAAGTTTGTGTTCGACCGGACGGCAAAGTATTCATCAGAATTGTTCAAGACATCGCTGTTAGGGGAACCAACGGTTGTGATGGGTGGAGCCGAGGGTAACAAGTTGTTATTCTCGAATGAGAACAAGCTGGTGAGGCTGTGGATGCCCGACAATGTGCACAAGTTGTTTCCCTCTTCGTTTCATGACACCAGCTCCAATGGAGATGCTGCCAAGAAGGTCAGAACCATGCTCCCTCAGTTCATAAAGCCTCAAGCACTCCAACGTTACGTTTCTGTCGTCGACTCCATGGCACACACCCACTTTGCTTCCCTTTGGGAACACAACTTTCAAGTCTCTGTATACCCTTTAGTCAAGAGGTACACGTTGTTGTTGTCATATCGTTTGTTGGTAAGCATTGAGGAGGAGAAGCACGTAACAAAGCTGGCAAAGCATTTTAAGCATGTGGGTGCAGGGTTGATATCGTTGCCTATTGACTTTCCCGGAACTAACTTCAACAAAGCAATCAAAGCAAGCAAATCGATAAGGAAGGATCTTATAGGAATCATAAGGCAAAGGAAGGTGGATCTAAGTGAAGGGAATGCGTCCCCAACACAAGACATATTGTCTCACATGTTGTTCATGTGCGGCAATAATAAAAATGGAGACTATATGATTGATGAATGGTTAATTGCTGATCAGATGCTTGGACTCTTGTTTGGAAGCTATGACACTGTTAGTTCTACCTGCACTTTAATTGTCAAATACCTTGCTGAGTTCCCTCACATATATGATAGAGTCTATCAAGAGCAAATGGAAATAGGAAAATCAAAATTAGAAGGAGATTTGTTGAATTGGAATGACATCAACAAGATGAGATACTCATGGAACGTAGCTTGTGAAGCTATGAGAATGACTCCTATAGCTCCTGGAGGTTTCAGGGAAGCCCTTCATGACTTTACCTTCAATGGTTTCTCAATTCCAAAAGGATGGAAGTTGTTTTGGAGTGCAAATTCAACACATAAGAGTGCAAAGTATTTTCCGGAGCCAGAGAAATTTGATCCAAGTAGATTCGAAGGAAATGGACCAGCTCCCTACACATTTGTGCCATTCGGTGGAGGACCAAGAATGTGCCCAGGAAACGAGTATGCACGCCTAGTCATAATGGTTTTCGTCCACAATTTGGTGAAACGCTTCAAATGGAAAATGTTGATTCCTCATGAGAAAATTGTCATTGATCCATTCCCCATGCCTACAAACAACCTCCCAGTTCGCCTTTATCCTCACAATCCCTACTAA 1461 0.4353 MYLIIMNILLWVCFLSLFLFLFLLFRHVFPFIAPKLPPGTMGYPIMGETLEFLSTGWKGEPEKFVFDRTAKYSSELFKTSLLGEPTVVMGGAEGNKLLFSNENKLVRLWMPDNVHKLFPSSFHDTSSNGDAAKKVRTMLPQFIKPQALQRYVSVVDSMAHTHFASLWEHNFQVSVYPLVKRYTLLLSYRLLVSIEEEKHVTKLAKHFKHVGAGLISLPIDFPGTNFNKAIKASKSIRKDLIGIIRQRKVDLSEGNASPTQDILSHMLFMCGNNKNGDYMIDEWLIADQMLGLLFGSYDTVSSTCTLIVKYLAEFPHIYDRVYQEQMEIGKSKLEGDLLNWNDINKMRYSWNVACEAMRMTPIAPGGFREALHDFTFNGFSIPKGWKLFWSANSTHKSAKYFPEPEKFDPSRFEGNGPAPYTFVPFGGGPRMCPGNEYARLVIMVFVHNLVKRFKWKMLIPHEKIVIDPFPMPTNNLPVRLYPHNPY 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g03106 486 Pfam Cytochrome P450 37 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g03106 486 PRINTS P450 superfamily signature 295 312 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g03106 486 PRINTS P450 superfamily signature 351 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g03106 486 PRINTS P450 superfamily signature 423 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g03106 486 PRINTS P450 superfamily signature 432 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g03106 486 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 425 434 IPR017972 GO:0005506|GO:0016705
Aip01g03106 486 PANTHER CYTOCHROME P450 26 16 481 - -
Aip01g03106 486 PANTHER BETA-AMYRIN 28-OXIDASE-LIKE 16 481 - -
Aip01g03106 486 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g03106 486 PRINTS E-class P450 group I signature 390 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g03106 486 PRINTS E-class P450 group I signature 422 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g03106 486 PRINTS E-class P450 group I signature 432 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g03106 486 SUPERFAMILY Cytochrome P450 29 482 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g03106 486 Gene3D Cytochrome P450 31 482 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g03106 Aip-Chr1 134201918 134205117 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g03106 26 387 Cytochrome P450 AT5G36110 50.959 3.90e-123 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g03106 K20667 - gmx:100801007 666.381