Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g03099 ATGGAAGATACACACATATGCATTGGAGACATGGCAAAAAGATTTGGATATAATAACAACCTACTTTCTGAGGAAGCTGTTTCATTTTACGGTGTATTTGATGGACATGGAGGGAAGAGCGCGGCTCAATTCGTGCGCGATCATCTGCCTAGGATCATTGCTGAGGATGCAGGCTTTCCTTTGGAACTTGAGAAGGTTGTTACAAAGTCTTTTTTGGACACTGATGCAGAGCTTAAAACATACTCTCTTGAATCTTGCCTCTCTTCTGGAACCACTGCACTCACTGCAATTATATTCGGAAGGTCATTGCTTGTAGCCAATGCAGGGGACTGCAGGGCTGTGTTGTCACGCCATGGCGCGGCAATAGAAATGTCCAAGGATCACAGGCCTTACTGCATCAAAGAGAGAAAGCGAATCGAGTCCCTAGGTGGATTCATTGATGATGGCTACCTGAATGGTCAGTTGGGTGTTACTCGCGCTCTAGGCGACTGGCATCTTGAAGGAATGAAGGAAACAGGTGGAGGTGGTGGACCATTGAGTGCTGAGCCTGAACTCAAATTGATGACATTGACCAAAGAAGATGAATTCTTGATAATAGCAAGTGATGGAATTTGGGATGTTTTCCGGAGCCAAAATGCTGTGGATTTTGCTCGGAGGAGGCTTCAAGAACACAATGATGTGAAGCAATGTTGCAAGCAAATAGTAGAGGAAGCAATAAAGAGAGGAGCAACAGATAACTTAACGGTTGTGATGGTGTGTTTTCACTCAGATCCACCACCCCCTGTGGTTGTGGAAAGAGCAAGAGTTAGAAGAAGCATATCTGCTGAGGGACTGCATAACCTCAAATGCCTGCTACAAGGTTAG 864 0.4525 MEDTHICIGDMAKRFGYNNNLLSEEAVSFYGVFDGHGGKSAAQFVRDHLPRIIAEDAGFPLELEKVVTKSFLDTDAELKTYSLESCLSSGTTALTAIIFGRSLLVANAGDCRAVLSRHGAAIEMSKDHRPYCIKERKRIESLGGFIDDGYLNGQLGVTRALGDWHLEGMKETGGGGGPLSAEPELKLMTLTKEDEFLIIASDGIWDVFRSQNAVDFARRRLQEHNDVKQCCKQIVEEAIKRGATDNLTVVMVCFHSDPPPPVVVERARVRRSISAEGLHNLKCLLQG 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g03099 287 CDD PP2Cc 1 254 IPR001932 -
Aip01g03099 287 SUPERFAMILY PP2C-like 1 255 IPR036457 -
Aip01g03099 287 SMART PP2C_4 4 252 IPR001932 -
Aip01g03099 287 Pfam Protein phosphatase 2C 1 246 IPR001932 -
Aip01g03099 287 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 1 275 - -
Aip01g03099 287 PANTHER PROTEIN PHOSPHATASE 2C 1 275 IPR015655 GO:0004722|GO:0006470
Aip01g03099 287 ProSitePatterns PPM-type phosphatase domain signature. 29 37 IPR000222 GO:0043169
Aip01g03099 287 Gene3D - 1 257 IPR036457 -
Aip01g03099 287 ProSiteProfiles PPM-type phosphatase domain profile. 1 254 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g03099 Aip-Chr1 134158169 134160246 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g03099 1 287 PP2C-type Phosphatase Gene Family AT2G25620 60.959 1.95e-121 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g03099 K14803 - gmx:100782648 471.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g03099 01 134158169 134160246 Aip01g03099 01 134158169 134160246 ECH