Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g03091 ATGGTGAGCTTGAAAGGGGGAACAAGGCCACCATGGGTGGGGCTGGGAGCTTCCGTGTGGGTTCAGGTGGCATCGGGAAATGGTTACACTTTCCCGCTCTATTCCCACTCTTTGAAGTCTGTCATGGGCTTCAACCAGCAGCAACTCACTCTCCTCGGTGTTGCCAACGACATCGGCGAGAATGTTGGTATTCTTCCTGGCCTTGCTTCCAACCACTTCCCTCCATGGCTTCTCCTCTTCATCGGTGCTCTCTTCTCCTTCATTGGCTACGGCCTTCTCTGGCTCCCCCTCAGCCACACCCTCTCTTCTCTTCCCTACGCCTTGCTATGGTTTTCCCTGGTTGTTGCAACCAACAGTTGTGCGTGGTTAACCACCGGGATTCTTGTAACCAACATGAGGAATTTCCCTATCAGCAGAGGCACGGTGGCCGGAATCCTCAAAGGGTACGGCGGCCTCAGCGCCGCCGTCTTTACTCAAATCTACGGGATAGTTCTTCACAATTCATCCTCCAATTTCCTCTTGTTCCTTGCAATTGGTATCCCTGCTGTGTGCTTCAGCATGATGTTTCTTGTTAGGCCTTGCACTCCACTTTCCACTGAAGATTCCAAAGAGAAAGGGCATTTTCTGTTCATCCAAGCTTCAAGTGTGGTATTGGGTTTATACATTCTTGCCACAAACATATTTGGTGACATTCTCCGCTTGAGTAGTGCACTTTCCTACCTCTTGGTGGCTCTCATGATTCTACTCCTCATGGCTCCACTTGCTATCCCTATCAAGATGACACTCTGTCCCAAAACAGGATCCACCCGATCACAAACACCTAATGCCTCCTCAGAACGTTTGGCCAAAGAAGACAACACCGAGCCGCTGCTGGCGTCTTCCTCGGCCAGTGGCCTCGGAAGCTTCTACGACACGGATCCCTCGGCCGAGGTGGCAATGCTTCTGGCCGTGGGCGAGGGAGCCGTGAAGAAGAAGAGAAGGCCTAAAAGAGGGGAAGATTTTAAGTTCACAGAGGCAATAGTAAAGGCTGATTTCTGGCTACTGTTTTTCATTTACTTTGTTGGTGTTGGAACTGGGGTCACTGTAATCAACAATCTAGCACAAATTGGCATTGCACAAGGTGAGGATGATACCACTATCTTGTTGTCCCTTTTCAGCTTTTTCAACTTTGTTGGTCGCCTTGGTGGAGGAGTTCTTTCAGAACATTTTGTCAAAACGAAAACAATTCCGCGCACGGTTTGGATGACATGCACTCAGGTAATGATGATGATCCTATACATCCTGTTTGCATATGCTATCAATGGGGCCCTATACCCTGCCATTGCACTTCTTGGAATCTGCTATGGAGTGCAATTCACAGTGGTGATTCCAACTGTGTCTGAGCTTTTCGGTTTGGAGCACTTTGGGATGTTGAGCAACTTCATATTCATGGGGAATCCACTTGGTGCATTCCTCTTCTCAGCACTTCTAGCAGGTACTGTGTATGACAATGAGGCTACAAGGCAACAAAGCATGGGAATCATTCCTTCAAGTGCTTCTTGCTTGGGCCCTGATTGCTTTAAGATCACATTCCTCACACTTTCTGCTGTTTGTGCTGTTGGTGCCTTTGCTGGTACCATCTTGGCTGTAAGAATTAAGCCTGTTTACCAAATGCTTTATGCTGGTGGTTCTTTCAAGTTACCACAAACTTCTTCACTTCACTAA 1704 0.483 MVSLKGGTRPPWVGLGASVWVQVASGNGYTFPLYSHSLKSVMGFNQQQLTLLGVANDIGENVGILPGLASNHFPPWLLLFIGALFSFIGYGLLWLPLSHTLSSLPYALLWFSLVVATNSCAWLTTGILVTNMRNFPISRGTVAGILKGYGGLSAAVFTQIYGIVLHNSSSNFLLFLAIGIPAVCFSMMFLVRPCTPLSTEDSKEKGHFLFIQASSVVLGLYILATNIFGDILRLSSALSYLLVALMILLLMAPLAIPIKMTLCPKTGSTRSQTPNASSERLAKEDNTEPLLASSSASGLGSFYDTDPSAEVAMLLAVGEGAVKKKRRPKRGEDFKFTEAIVKADFWLLFFIYFVGVGTGVTVINNLAQIGIAQGEDDTTILLSLFSFFNFVGRLGGGVLSEHFVKTKTIPRTVWMTCTQVMMMILYILFAYAINGALYPAIALLGICYGVQFTVVIPTVSELFGLEHFGMLSNFIFMGNPLGAFLFSALLAGTVYDNEATRQQSMGIIPSSASCLGPDCFKITFLTLSAVCAVGAFAGTILAVRIKPVYQMLYAGGSFKLPQTSSLH 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g03091 567 SUPERFAMILY MFS general substrate transporter 234 547 IPR036259 -
Aip01g03091 567 CDD MFS_Mch1p_like 10 535 - -
Aip01g03091 567 Pfam Nodulin-like 11 258 IPR010658 -
Aip01g03091 567 MobiDBLite consensus disorder prediction 266 280 - -
Aip01g03091 567 MobiDBLite consensus disorder prediction 266 296 - -
Aip01g03091 567 Gene3D MFS general substrate transporter like domains 341 548 IPR036259 -
Aip01g03091 567 PANTHER NODULIN-LIKE/MFS TRANSPORTER 3 565 - -
Aip01g03091 567 SUPERFAMILY MFS general substrate transporter 17 196 IPR036259 -
Aip01g03091 567 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g03091 Aip-Chr1 134011774 134014293 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g03091 5 567 Nodulin-like Gene Family AT1G80530 55.477 0.0 642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g03091 - - gmx:100787328 822.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g03091 01 134011774 134014293 Aip01g03091 01 134011774 134014293 ECH
Aip01g03091 01 134011774 134014293 Aip03g02853 03 71168053 71171840 PCT