Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g03064 ATGTTTAACGGCATTGAGAAAGTCCGCAATATAGTGTTCATTCTCAAAACTACAAGGCACAATGGGTTTCCTGTTATCGATGAGCCTCCACTTTCTGAAGCACCAGTTTTATCAGGTTTAATCCTCCGTGACCATCTTGTTACTTTGTTAAAGAATAAAGTTTTTTCATCCACACCAAGGGCGATAGGGGATGATGGCTTCAAGAAGTTTACATCAGATGATTTTGCAAAGAAGGGTTCAAACAAAGGTGAAAAGATAGAAGATATACAACTAACAGAGGAAGAGATGGAAATGTTCATAGATTTACATCCATTTACAAATACATCACCATATACTGTTGTGGAGACAATGTCACTGGGAAAGGCCCTTACACTTTTTCGAGAAGTAGGTTTAAGGCACCTGCTAGTGATACCCAAGATCACTGGTAGATCACCTGTAGTGGGTATACTAACGCGACACGACTTCATGCCGGAACATATATTGGGGGTGCATCCTTTGCTGGTAAGTAGCAGGTGGAAAAGACTAAGGTTCCGGTTCCCTTGTCTGGGAAATCTCTTCTCTGGCTTCTGA 570 0.414 MFNGIEKVRNIVFILKTTRHNGFPVIDEPPLSEAPVLSGLILRDHLVTLLKNKVFSSTPRAIGDDGFKKFTSDDFAKKGSNKGEKIEDIQLTEEEMEMFIDLHPFTNTSPYTVVETMSLGKALTLFREVGLRHLLVIPKITGRSPVVGILTRHDFMPEHILGVHPLLVSSRWKRLRFRFPCLGNLFSGF 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g03064 189 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 2 180 - -
Aip01g03064 189 SUPERFAMILY CBS-domain pair 7 156 IPR046342 -
Aip01g03064 189 CDD CBS_pair_voltage-gated_CLC_euk_bac 2 158 - -
Aip01g03064 189 Pfam CBS domain 107 155 IPR000644 -
Aip01g03064 189 Gene3D - 6 157 IPR046342 -
Aip01g03064 189 PANTHER CHLORIDE CHANNEL PROTEIN 2 180 - -
Aip01g03064 189 ProSiteProfiles CBS domain profile. 106 166 IPR000644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g03064 Aip-Chr1 133785942 133786793 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g03064 1 180 Ion Channels AT5G33280 66.667 7.07e-84 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g03064 K05016 - rcu:8263865 288.5