Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g03063 ATGGCCATCTTTGCATTATTATTGATGCTGTTACTCCAATTGTCAATAATTTCTAGCTCAGCAGTTATCTTGAGATCAAATGATTGTGGCACTGATTGGGTAGCTCATTCATATTCTAGTGATGGTGAAGAACTGTTTTACATAAATGGGAATGTAGTTAACAAAGTTGCTTTCTGTGAGGCCCTCCAATTGTACATTGCAAATGGTTGCGATTTGAAGGACTACTTTGGAAGTAACAACTGCGTGATGGATGGCTCATTTGTTAACTTACCTTCGATGGCAGGAAGGAAACTACTTCAGAAGGATTCGAGCAGTAAATCCGAATCGCAAGGGGTTTCCAAAGATGTGTCTCCCAAAGTTGGGCTTTTCGCGGGTGGAGCATTGTTGGTATGTTGTGCTGTTCTTTGTCCATGTATTTATGGGAAGAAACGAAAAGCAACTGCTCATGCTGTTTTGACCAAGGACCCGAATTCAATATTGGACTCAGCTTCCTCCTTCGAAGCAAATTCTGTCCCGGAAAAGGTCCAAGTCCCAGCCAGTCCACTTCGAGTGCCACCTAGTCCTTCAAGATTCTCAGCGTCTCCAAAACTCAAAAGAATTGAATCATTGCATCTCAACCTCAATCAGATTGCAAGAGCTACCCGTAACTTCTCAGAAACATTGCAGATAGGAGAAGGAGGTTTTGGAACTGTCTACAAGGCTCAGTTAGAAGATGGCCACGTCGTGGCTGTAAAACGTGCAAAAAGGGAACATTTTGAGAGCTTGAGAACTGAATTCAGCAGTGAAGTTGAACTTCTGGCTAAAATTGATCATCGGAACCTAGTGAAGCTACTAGGTTATATTGAAAAAGGACATGAACGCCTTCTTATTACAGAGTATGTGCCGAATGGTACTCTTCGAGAACACTTAGATGGTCAGCGTGGAAAAATCCTAGACTTCAATCAGCGCCTGGAAATTGCTATTGATGTTGCTCATGGCTTGACCTATTTGCATCTGTATGCAGAGAAGCCAATTATCCATCGAGATGTGAAATCATCCAACATTCTTCTGACAGAAAGCATGCGAGCTAAAGTTGCTGATTTTGGATTTGCAAGGATTGGCCCTATGAACTCCGATCAAACACACATTTCTACCAAAGTGAAGGGAACAGTTGGTTATTTGGATCCTGAGTATATGAAAACATACCAACTCACTACCAAGAGTGATGTTTACTCATTTGGAATTTTGCTTTTAGAAATTTTAACAGGTCGTCGTCCTGTGGAGTTGAAGAAAACTGTTGAAGAGAGGGTTACACTCAGATGGGCTTTCAGGAAGTTCAATGAAGGAAGGGTGGTGGAGCTGGTGGATCCGTTAATGGAAGAAGCTGTAAACTCTGATGTTCTGATGAAGATGTTTGATTTGGCATTTCAGTGTGCAGCACCCGTCCGGACAGATAGACCTGACATGAAAGCAGTGGGAGAGCAATTGTGGTCAATTAGGGCAGATTACTTTAAGAATTCAAGAAGTAATTAG 1512 0.4206 MAIFALLLMLLLQLSIISSSAVILRSNDCGTDWVAHSYSSDGEELFYINGNVVNKVAFCEALQLYIANGCDLKDYFGSNNCVMDGSFVNLPSMAGRKLLQKDSSSKSESQGVSKDVSPKVGLFAGGALLVCCAVLCPCIYGKKRKATAHAVLTKDPNSILDSASSFEANSVPEKVQVPASPLRVPPSPSRFSASPKLKRIESLHLNLNQIARATRNFSETLQIGEGGFGTVYKAQLEDGHVVAVKRAKREHFESLRTEFSSEVELLAKIDHRNLVKLLGYIEKGHERLLITEYVPNGTLREHLDGQRGKILDFNQRLEIAIDVAHGLTYLHLYAEKPIIHRDVKSSNILLTESMRAKVADFGFARIGPMNSDQTHISTKVKGTVGYLDPEYMKTYQLTTKSDVYSFGILLLEILTGRRPVELKKTVEERVTLRWAFRKFNEGRVVELVDPLMEEAVNSDVLMKMFDLAFQCAAPVRTDRPDMKAVGEQLWSIRADYFKNSRSN 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g03063 503 Gene3D Phosphorylase Kinase; domain 1 189 293 - -
Aip01g03063 503 Gene3D Transferase(Phosphotransferase) domain 1 294 502 - -
Aip01g03063 503 PANTHER NODULATION RECEPTOR KINASE-LIKE PROTEIN 11 500 - -
Aip01g03063 503 ProSitePatterns Serine/Threonine protein kinases active-site signature. 338 350 IPR008271 GO:0004672|GO:0006468
Aip01g03063 503 ProSiteProfiles Protein kinase domain profile. 217 497 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g03063 503 PANTHER OS07G0166700 PROTEIN 11 500 IPR045272 GO:0004714|GO:0006468
Aip01g03063 503 Pfam Protein tyrosine and serine/threonine kinase 222 489 IPR001245 GO:0004672|GO:0006468
Aip01g03063 503 ProSitePatterns Protein kinases ATP-binding region signature. 223 245 IPR017441 GO:0005524
Aip01g03063 503 SUPERFAMILY Protein kinase-like (PK-like) 201 492 IPR011009 -
Aip01g03063 503 CDD STKc_IRAK 223 489 - -
Aip01g03063 503 SMART serkin_6 217 491 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g03063 Aip-Chr1 133781604 133785436 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g03063 202 492 Receptor kinase-like Gene Family AT5G59700 45.704 1.11e-75 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Aip01g03063 PK_Tyr_Ser-Thr 1.3e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g03063 - - aprc:113845864 789.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g03063 01 133781604 133785436 Aip01g03063 01 133781604 133785436 ECH