Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g03036 ATGGGTTTCCGTTTACCTGTTATTCGAAGGACATCATCATTCTCAGCTAGCCAAGCAGCTTCAAAATCCGTGGAAGTCCCAAAGGGGCATCTAGCAGTCTATGTCGGAGAGAAACAGAAGCGGTTTGTGATTCCCGTTTCATACTTGAACCAACCTTCAATCCAAGACTTGTTGAGCCAAGCTGAGGAAGAGTTTGGATATGATCATCCTATGGGAGGTCTAACAATTCCATGCAGTGAAGATGTCTTCCAACAAATCACTTCTCACTTGAATTGA 276 0.4384 MGFRLPVIRRTSSFSASQAASKSVEVPKGHLAVYVGEKQKRFVIPVSYLNQPSIQDLLSQAEEEFGYDHPMGGLTIPCSEDVFQQITSHLN 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g03036 91 PANTHER AUXIN-INDUCED PROTEIN 6B 2 91 - -
Aip01g03036 91 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 2 91 IPR003676 GO:0009733
Aip01g03036 91 Pfam Auxin responsive protein 12 89 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g03036 Aip-Chr1 133426181 133426456 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g03036 5 84 Calmodulin-binding Proteins AT5G20810 46.250 4.19e-17 70.5