Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g03035 ATGAAGCCAATTACCCAACCCAGTAACCTTAGCTCCACACAACGGCTAAACGCGAACCCATCCCTCCCATCGCCTTCGAGCTCCTCCTTCCTCTCTCCGTCATCGATCTCACTCCCTCACCTCCGTCCATCTCCCGCCGCCGTCGCCGAAAGGAGCTTTGAAGCCACCGTCGTTATCGTGCAGCTTTGTTCCACCATCGTGCAGCTACTGTTTCAGCTTAGCACCGTCGCGCAGCTCGGTTCCATCGTCGCCGGGCTCGCCTCCTTTTTTTGTCGCGCAGCTCTGTTCCATCGTCGCCGACGCTATCTCTGTTCCACCTGTCATCCCTTCGGTCGTGCCCTTAAGGCTGTGTTTGATGAGGATGAGGAAGATAAATACAAGGAAAGGAATCCGAAAAATAGTTTGAAGAGAAAAGAGAGTGGCGGTGGAGAAAAGTCAACCTTGGAAGAATTGATAAGGGAAGAGGAGAAGAAAAAGGAGAAAATCAACAGGAAGGACTATTGGTTGCACGAGGAAATCATTGTTAAGGTTATGAACAAGGCCTTGGCAGAGAAGGGGTACTACAAGCAAAAGGGTGTGGTGAGAAGAATATGCTTAAATACAGTTGCTCTTGCCTTCAAAAACAACACAACTCATTGA 639 0.4977 MKPITQPSNLSSTQRLNANPSLPSPSSSSFLSPSSISLPHLRPSPAAVAERSFEATVVIVQLCSTIVQLLFQLSTVAQLGSIVAGLASFFCRAALFHRRRRYLCSTCHPFGRALKAVFDEDEEDKYKERNPKNSLKRKESGGGEKSTLEELIREEEKKKEKINRKDYWLHEEIIVKVMNKALAEKGYYKQKGVVRRICLNTVALAFKNNTTH 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g03035 212 Gene3D - 172 204 - -
Aip01g03035 212 PANTHER KIN17 KIN, ANTIGENIC DETERMINANT OF RECA PROTEIN HOMOLOG 117 198 IPR037321 -
Aip01g03035 212 Coils Coil 145 165 - -
Aip01g03035 212 MobiDBLite consensus disorder prediction 1 28 - -
Aip01g03035 212 Pfam KN17 SH3-like C-terminal domain 164 197 IPR041330 -
Aip01g03035 212 MobiDBLite consensus disorder prediction 127 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g03035 Aip-Chr1 133425120 133426087 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g03035 105 203 C2H2 Transcription Factor Family AT1G55460 54.902 1.60e-18 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g03035 K13102 - gmx:100784271 122.479