Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g03024 ATGGGTCAATTGAGGAAGAATGTTGCAATTATTGTTGCAATGATCATGATTGTTGTGACAAAAGCTGAAGAACACATAGTTGGAGGAGATAGCATAGGGTGGACTAGTTATCCACCTGGTGGTGCTTCTTTCTATTCAAATTGGGCTTCAAACCATACTTTCATAGTGAATGACACCTTAGTGTTTAAATTTGAATCTGGGAGCCATTCAGTGGCAGAACTTACAAAGAATAACTACGAAAAATGCGACGAAAATGAGAAGATAGAATCCTATGTGATAGGACCAGCCAGAGTGACCCTTAACCGTGCTGGAAGGTTCTATTTTTCATGCACATTCTCAGGACATTGCAGCAGTGGCCAAAAGCTAAGTGTTGAAGTAGTCACTGGTAATTTTTCTTCTGCACCAAGAAAAGCTCCTTCTAGTTCTACTCCTCCTCCTCCTCCAAGTGGCTCATCCACTTCTGTAGCTTCTACTACCTTGTCTATTTTCCTTACAACCATTACCTTCAAAACTTTGTTCCAATTTTAG 528 0.4034 MGQLRKNVAIIVAMIMIVVTKAEEHIVGGDSIGWTSYPPGGASFYSNWASNHTFIVNDTLVFKFESGSHSVAELTKNNYEKCDENEKIESYVIGPARVTLNRAGRFYFSCTFSGHCSSGQKLSVEVVTGNFSSAPRKAPSSSTPPPPPSGSSTSVASTTLSIFLTTITFKTLFQF 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g03024 175 ProSiteProfiles Phytocyanin domain profile. 23 128 IPR003245 GO:0009055
Aip01g03024 175 SUPERFAMILY Cupredoxins 22 127 IPR008972 -
Aip01g03024 175 Pfam Plastocyanin-like domain 43 120 IPR003245 GO:0009055
Aip01g03024 175 PANTHER BLUE COPPER PROTEIN 9 160 IPR039391 GO:0009055
Aip01g03024 175 MobiDBLite consensus disorder prediction 134 155 - -
Aip01g03024 175 PANTHER PLASTOCYANIN-LIKE DOMAIN PROTEIN 9 160 - -
Aip01g03024 175 Gene3D - 22 137 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g03024 Aip-Chr1 133296087 133296702 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g03024 7 146 Phytocyanin Superfamily AT2G25060 37.143 5.05e-25 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g03024 - - gsj:114392869 167.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g03024 01 133296087 133296702 Aip01g03024 01 133296087 133296702 ECH