Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g03023 ATGGCTACTAACATTGGAATTCTACTGCTACTAATTGTGGCATCATCACTAGCACAAGCTGCACAGCATGTAGTTCCATGGATGATTCCTACTACTCAAGGCTCCTCCTTCTACTCCAATTTGTTTGCTAAAACTACATTCAATCTAAACGACATTCTTGTCTTCAACTACACAACTGGGACACATAATGTTGTCACACTTTCAAAGGATGATTTCAAAGATTGCAGTGTCAAGAACAAGATGGAAACATTTGAGGTTGGACCTACAATGATCAAGCTCAATCGAACCGGAGAATACTATTTCGCCTGCGCCTTCCCGGCTCATTGCTCCCTTGGCCAGAAGCTTAGTGTCAATGTCATGGCCTCTTCTTCTTCTTCCCCGGAGGCTGCACCAGCCGTGGCTCCTTCGTCCCCGGCGTCACGCCTCTCTGTTGCTGCTACTTTCTCTGTTCTTCTCATGCTCATTGCCATAAACATCTTGTTCTAG 486 0.4547 MATNIGILLLLIVASSLAQAAQHVVPWMIPTTQGSSFYSNLFAKTTFNLNDILVFNYTTGTHNVVTLSKDDFKDCSVKNKMETFEVGPTMIKLNRTGEYYFACAFPAHCSLGQKLSVNVMASSSSSPEAAPAVAPSSPASRLSVAATFSVLLMLIAINILF 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g03023 161 ProSiteProfiles Phytocyanin domain profile. 21 121 IPR003245 GO:0009055
Aip01g03023 161 ProSitePatterns Type-1 copper (blue) proteins signature. 97 113 IPR028871 -
Aip01g03023 161 Gene3D - 23 133 IPR008972 -
Aip01g03023 161 PANTHER PLASTOCYANIN-LIKE DOMAIN PROTEIN 5 150 - -
Aip01g03023 161 SUPERFAMILY Cupredoxins 32 119 IPR008972 -
Aip01g03023 161 PANTHER BLUE COPPER PROTEIN 5 150 IPR039391 GO:0009055
Aip01g03023 161 Pfam Plastocyanin-like domain 35 113 IPR003245 GO:0009055
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g03023 7 161 Phytocyanin Superfamily AT2G25060 28.049 2.43e-20 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g03023 - - pvu:PHAVU_003G166500g 140.198