Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g03021 ATGAGCGGCGAAACCGTACCGGTAGAGGAAGCAGAAGCGATGGATTCGTCCGTCGTAGATGCCGACATAGATGGAGAAGCAGCAGTGAGGATTGTTGATGGGATAGGGTCCTTTGGCGCAATTGAATTTTCTTCCCTGATAGCCAAGGACGTCCTTACGACGAAGTTCACAAGCCTACAGGAAGCTTATGACTACTACAACGAATATGGTCGCATCAAGGGATTTTTGGTCAGGAGGTCCAAGGTGGGTTGCAGAACAAAGCAGGGGGCGGAGGGCGAAATCATTTGGCAGATATTCGTGTGCTCGAGGGAAGGAGAGCGATACGGGAAACACATGCAACGGGAAGACAGGAAGATGGATCCTCGACCGATCACGCGGTGTGGGTGTGAAGCCCGGATTAAGGTCCACGTTGATGATGCCAGCAGGCGATGGTTTGTTGAACAATTCTTCGATAACCATAATCATCCCATGCTGGATGCGAGGTTTAGGGGTCTGTCGCGGTCACACAGAGCAGTCAAGGAAGGTGATTTGCACCAAATCAATTCCATGAGGAAATCTGGGATGCGGGTGCCGACAATTTTCGGTGCCTTTGCCAATCAGTCAGGGGGATTCGAGACTGTTGGGTTCGAGATAAAGGATATATATAATGCGATAGAGAAGCAAAGGCGGGCTGGCGCGATAGATGCTGAGGCTGCGTTGAAGTTCTTGGGAACTTTAAGGACCACTGATTCGGGGATGTCCTGGGTTTTGATGCAACGTACGGTCGTAACAAATACAAGTGCCATTTGGTAA 792 0.5025 MSGETVPVEEAEAMDSSVVDADIDGEAAVRIVDGIGSFGAIEFSSLIAKDVLTTKFTSLQEAYDYYNEYGRIKGFLVRRSKVGCRTKQGAEGEIIWQIFVCSREGERYGKHMQREDRKMDPRPITRCGCEARIKVHVDDASRRWFVEQFFDNHNHPMLDARFRGLSRSHRAVKEGDLHQINSMRKSGMRVPTIFGAFANQSGGFETVGFEIKDIYNAIEKQRRAGAIDAEAALKFLGTLRTTDSGMSWVLMQRTVVTNTSAIW 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g03021 263 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 23 180 - -
Aip01g03021 263 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 23 180 - -
Aip01g03021 263 Pfam FAR1 DNA-binding domain 64 158 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g03021 Aip-Chr1 133275489 133276280 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip01g03021 FAR1 4.4e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g03021 - - aip:107615234 531.561