Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aip01g03000 | atgatTTCACCAAAGGACACAGCAAAGCCACGTCAAAATGATGCTTCTTCACCTACAAGTAACGGTGCTGCTTCCAATTCGAAACCTTGTTCACGAGGAAGGAGGACTTTAACTGTTCCAAAGGAACCAAAGTTTCATAGTCTCCATGTGATATCTGTTAAAGTAATTAGGAATAAGCAAACTAGTCAATCCGAGGGTTATGGGTTTATTGAGTTTACAAGCCGTGCTGCTGCTGAGAGAATACTACAATCATTCAATGGCGCCCTTATGCCAAATGGCGAGCAAGATTTCAGGTTGAACTGGGCAACCTTTAGCGCTGGCGCGAGAGGCGTCATGATGACAGTCCATATTACACTATATTTGTTGGAGATTTGGCTGCAGATGTTACGGACCACCACCTTCAGGAGACATTTAGGGGTAGATATTCCTCGGTTAAGGGGCTTAAAAGAAAGGCAGTTTACGAGAAAAGAAATGGTAGAAGTGCTAGTGCAGTTAAGAAAAGATAACACAGAGGAGATTGAAGGAAGCTGCTGA | 534 | 0.4307 | MISPKDTAKPRQNDASSPTSNGAASNSKPCSRGRRTLTVPKEPKFHSLHVISVKVIRNKQTSQSEGYGFIEFTSRAAAERILQSFNGALMPNGEQDFRLNWATFSAGARGVMMTVHITLYLLEIWLQMLRTTTFRRHLGVDIPRLRGLKERQFTRKEMVEVLVQLRKDNTEEIEGSC | 177 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aip01g03000 | 177 | MobiDBLite | consensus disorder prediction | 9 | 33 | - | - | |
Aip01g03000 | 177 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 50 | 104 | IPR000504 | GO:0003723 | |
Aip01g03000 | 177 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 50 | 91 | IPR000504 | GO:0003723 | |
Aip01g03000 | 177 | PANTHER | TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED | 47 | 115 | - | - | |
Aip01g03000 | 177 | SUPERFAMILY | RNA-binding domain, RBD | 49 | 104 | IPR035979 | GO:0003676 | |
Aip01g03000 | 177 | MobiDBLite | consensus disorder prediction | 1 | 39 | - | - | |
Aip01g03000 | 177 | CDD | RRM1_SECp43_like | 45 | 105 | - | - | |
Aip01g03000 | 177 | PANTHER | POLYADENYLATE-BINDING PROTEIN RBP45B | 47 | 115 | - | - | |
Aip01g03000 | 177 | Gene3D | - | 44 | 103 | IPR012677 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aip01g03000 | Aip-Chr1 | 132518584 | 132521067 | Wgd |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Aip01g03000 | 01 | 132518584 | 132521067 | Aip04g00483 | 04 | 5632844 | 5636674 | PCT |