Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02974 aTGTACATAGCAGCTCACTGCCGTGCTTCATCTCCGCCGCTGCCATGGACGCCGTGGTTGGATTCTTGGAGTTGCTGTTCTGCCACCGCCGTTGCTGTAGCCGTGCTTCTATTGCCGGAGAACGGCGCTGTTGTTGCCAGAGAACCACCGTTGAAGCCGCTACTGTTTTGGAGGAGTTTGCAAGCTGTCCCTAGTATTTGCCAATTCAAGACATTCACAGTGATGATGGTGGATACGGGTTCCGTGTCAAGAAGTGCTGATTCCCTTGTAGATATGATGCCAGAGAAAGATGATGATGGCCGGTTTGCAAGTGGAGGGTGGAATAGTGAGAATGGAAGGCTTAGCTGTGGGTATTCAAGCTTCAGAGGGGAGAAAGTATTGATGGAGAATTTTTACGATATTAAAACATTAAAAATTGGTGGTCATTCAGTATGCTTACTTGGAGTATTTGATGGTCATGGTGGTTTTCGTGGTGCAGAGTATTTGAAAGAGCATCTCTTTGATAATCTCATGAAGCATCCAAAATCTTTTACTAATGCCAAATTGCTATAA 552 0.4547 MYIAAHCRASSPPLPWTPWLDSWSCCSATAVAVAVLLLPENGAVVAREPPLKPLLFWRSLQAVPSICQFKTFTVMMVDTGSVSRSADSLVDMMPEKDDDGRFASGGWNSENGRLSCGYSSFRGEKVLMENFYDIKTLKIGGHSVCLLGVFDGHGGFRGAEYLKEHLFDNLMKHPKSFTNAKLL 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02974 183 Gene3D - 107 182 IPR036457 -
Aip01g02974 183 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 67 182 - -
Aip01g02974 183 SUPERFAMILY PP2C-like 108 175 IPR036457 -
Aip01g02974 183 ProSitePatterns PPM-type phosphatase domain signature. 146 154 IPR000222 GO:0043169
Aip01g02974 183 PANTHER ALPHABET, ISOFORM E-RELATED 67 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02974 Aip-Chr1 132114144 132115013 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02974 69 182 PP2C-type Phosphatase Gene Family AT5G53140 60.526 2.91e-43 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02974 K17506 - gmx:100813138 195.282