Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02973 ATGATGGTGGATACGGGTTCCGTGTCAAGAAGTGCTGATTCCCTTGTAGATATGATGCCAGAGAAAGATGATGATGGCCGGTTTGCAAGTGGAGGGTGGAATAGTGAGGATGGAAGGCTTAGCTGTGGGTATTCAAGCTTCAGAGGGGAGAAAGTATTGATGGAGAATTTTTACGATATTAAAACATTAAAAATTGGTGGTCATTCAGTATGCTTACTTGGAGTATTTGATGGTCATGGTGGTTTTCGTGGTGCAGAGTATTTGAAAGAGCATCTCTTTGATAATCTCATGAAGCATCCAAAATCTTTTACTAATGCCAAATTGCTATAA 330 0.4 MMVDTGSVSRSADSLVDMMPEKDDDGRFASGGWNSEDGRLSCGYSSFRGEKVLMENFYDIKTLKIGGHSVCLLGVFDGHGGFRGAEYLKEHLFDNLMKHPKSFTNAKLL 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02973 109 ProSitePatterns PPM-type phosphatase domain signature. 72 80 IPR000222 GO:0043169
Aip01g02973 109 MobiDBLite consensus disorder prediction 1 36 - -
Aip01g02973 109 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 11 108 - -
Aip01g02973 109 PANTHER ALPHABET, ISOFORM E-RELATED 11 108 - -
Aip01g02973 109 Gene3D - 33 108 IPR036457 -
Aip01g02973 109 MobiDBLite consensus disorder prediction 16 30 - -
Aip01g02973 109 SUPERFAMILY PP2C-like 35 101 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02973 Aip-Chr1 132108019 132108348 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02973 1 108 PP2C-type Phosphatase Gene Family AT5G53140 62.963 9.84e-44 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02973 K17506 - gmx:100805795 185.652