Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02950 ATGTTGGGGTCAAAGAAGATTTCCATTCTGGCTATAGATATGAATATTCTTCTGTGTTTCATTCTTTCATTAACTACTACTATTACTACATCTTTCATTAAAGAAGCATCATCATCAGAATTTAATGTGAAAAGCTATGAAGCTGATAGAGTAAGAGATCTTCCTGGCCAACCTTCAAGCCCATTGGTCTCACACTTTTCAGGATATATCACTGTCAATCAAGAACATGGGAGGGCCCTTTTTTACTGGTTCTTTGAAGCTCAATCTGATCCTTCCAACAAGCCCCTCCTTCTATGGCTCAATGGAGGACCTGGATGCTCCTCAATTGGGTATGGTGCTGTAGTTGAGATAGGACCTCTTTTAGTCAACAAAAATGGTGAAGGACTACAATTCAACCCATATTCATGGAATCAAGAAGCAAATTTATTATTTGTGGAGTCCCCTGTTGGAGTTGGTTTCTCTTACACCAACACATCCTCTGACCTCACTACATTAGAGGATAGCTTTGTTGCTGAGGATGCCTACAATTTCTTGGTAAATTGGCTACAAAGATTCCCTCAGTTCAAATCAAGGGACTTCTTTATATCAGGAGAAAGCTATGCTGGCCATTATGTCCCTCAACTTGCAGAGCTAGTATTTGATCGAAATAAGGATAGAAACAAGTACCCTTTTATTAATCTTAAAGGTTTTATTGTGGGGAATCCAGAAACTCATGATTACTATGACTACAAAGGGCTTCTAGAATATGCATGGAGCCATGCAGTTATATCAGATGAACAATATGAGAAAGCAAAGAAAGTATGTGATTTTAAACAAATTGATTGGTCTAAGGAATGCAATGAGGCCATGAACACAGTGTGGCAAGATTACTCAGAAATTGACATATACAACATTTATGCCCCTAAATGTACTCTAAATAGCAGCACTTCCTCATTATTATTAGATGATGATGATGAAATTGAGACCAAGAGAATGAGAATTTTTGGTGGCTATGATCCTTGTTATTCCACATATGCAGAACAATATTTCAATAAGATAGATGTTCAATCATCTTTTCATGCTAATATTAGAGGAGAAAACACGAACACTTCTAGTGTAACATGGAAGGTTTGCAATGCTTCCATATTGAGGACTTACAACTTCTCTGTATTTTCGATCCTACCCATCTACACCAAACTCATCCAGGGTGGGCTTAAGATATGGGTTTACAGTGGAGATGCAGATGGAAGAGTACCTGTGATAGGTACACGGTACTGCATTGAGGCCCTTAATTTACCTCTCAAGACTGCTTGGCGTACTTGGTACCATCAAAATCAGGTGGGAGGAAGAATAGTGGAGTATGAAGGGGTGACATATGTGACAGTGAGAGGGGCAGGTCACTTGGTGCCTCTAAACAAACCCAATGAAGCTCTCTCCCTCATTCATTCCTTTCTAACAGGGGACCATCTTCCTACTCGCTAA 1461 0.3936 MLGSKKISILAIDMNILLCFILSLTTTITTSFIKEASSSEFNVKSYEADRVRDLPGQPSSPLVSHFSGYITVNQEHGRALFYWFFEAQSDPSNKPLLLWLNGGPGCSSIGYGAVVEIGPLLVNKNGEGLQFNPYSWNQEANLLFVESPVGVGFSYTNTSSDLTTLEDSFVAEDAYNFLVNWLQRFPQFKSRDFFISGESYAGHYVPQLAELVFDRNKDRNKYPFINLKGFIVGNPETHDYYDYKGLLEYAWSHAVISDEQYEKAKKVCDFKQIDWSKECNEAMNTVWQDYSEIDIYNIYAPKCTLNSSTSSLLLDDDDEIETKRMRIFGGYDPCYSTYAEQYFNKIDVQSSFHANIRGENTNTSSVTWKVCNASILRTYNFSVFSILPIYTKLIQGGLKIWVYSGDADGRVPVIGTRYCIEALNLPLKTAWRTWYHQNQVGGRIVEYEGVTYVTVRGAGHLVPLNKPNEALSLIHSFLTGDHLPTR 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02950 486 Gene3D - 334 375 - -
Aip01g02950 486 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 26 35 485 - -
Aip01g02950 486 ProSitePatterns Serine carboxypeptidases, histidine active site. 450 467 IPR033124 GO:0004185
Aip01g02950 486 Gene3D alpha/beta hydrolase 45 305 IPR029058 -
Aip01g02950 486 ProSitePatterns Serine carboxypeptidases, serine active site. 195 202 IPR018202 GO:0004185
Aip01g02950 486 SUPERFAMILY alpha/beta-Hydrolases 47 484 IPR029058 -
Aip01g02950 486 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 35 485 IPR001563 GO:0004185|GO:0006508
Aip01g02950 486 Pfam Serine carboxypeptidase 55 479 IPR001563 GO:0004185|GO:0006508
Aip01g02950 486 Gene3D - 386 480 - -
Aip01g02950 486 PRINTS Carboxypeptidase C serine protease (S10) family signature 132 144 IPR001563 GO:0004185|GO:0006508
Aip01g02950 486 PRINTS Carboxypeptidase C serine protease (S10) family signature 145 155 IPR001563 GO:0004185|GO:0006508
Aip01g02950 486 PRINTS Carboxypeptidase C serine protease (S10) family signature 181 206 IPR001563 GO:0004185|GO:0006508
Aip01g02950 486 PRINTS Carboxypeptidase C serine protease (S10) family signature 450 463 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02950 Aip-Chr1 131772163 131777715 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02950 368 483 Calmodulin-binding Proteins AT2G22960 32.479 8.76e-14 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02950 K16297 - gmx:100815141 774.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02950 01 131772163 131777715 Aip01g02950 01 131772163 131777715 ECH