Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02919 ATGGCCTCAACATCGGTGGTGTCAAACCCAGCACCAACAAGCACGGACCGGTCACGTGACTCAAAGAGGAAGAAGAAGAAGAAACTGCAGAAAGAATATCTTCAGAGTCACTTCAAATGGAAATCGCAAGCTCAGCAACAAATTTATTCCTCCAAGCTCCACCAGGCCTTAGCGAGAGTCAACCTCGCCTCCACCTCCGTCCCCCGCCGCGGAAAGGCCGTCCGAGAAGCCGCGGACAGAGTCCTCGCCGCCACAGCTAAAGGCAAAACACGGTGGAGCCGCGCCATACTCGCCAACCGCAGGCTCAAGCTCAAGTTCTCCAAACAGCACAAGAGACAGAGAGTGGCGCAGCCTGCGCTCACCCGATCCAAGAAGCCACGTGTCAGCGTTTTACGCCTCAAAGGGAAGAAGAACTTACCGGCTGTGCAGAGGAAACTCAGGTTCTTGGCGCGACTCGTTCCCGGTTGCCGGAAAGAACCTGTGCCGGTCATTCTCGAAGAGGCCATCGATTACATACCGGCGCTTGAGATGCAAGTCAGAGCCATGGCTGCTCTTCTCAACCTTCTCTCCGGCTCCGGCGCCGCCGCCTCAGACTCCTCTTCCGGCGCCGGCACAAGCTCGGCGCCGCCAAGCTGA 636 0.577 MASTSVVSNPAPTSTDRSRDSKRKKKKKLQKEYLQSHFKWKSQAQQQIYSSKLHQALARVNLASTSVPRRGKAVREAADRVLAATAKGKTRWSRAILANRRLKLKFSKQHKRQRVAQPALTRSKKPRVSVLRLKGKKNLPAVQRKLRFLARLVPGCRKEPVPVILEEAIDYIPALEMQVRAMAALLNLLSGSGAAASDSSSGAGTSSAPPS 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02919 211 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 126 175 IPR011598 GO:0046983
Aip01g02919 211 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 9 204 IPR044660 GO:0006355
Aip01g02919 211 CDD bHLH_AtIBH1_like 136 186 IPR044549 GO:0006355
Aip01g02919 211 MobiDBLite consensus disorder prediction 1 15 - -
Aip01g02919 211 PANTHER MYC-TYPE, BASIC HELIX-LOOP-HELIX (BHLH) DOMAIN-CONTAINING PROTEIN-RELATED 9 204 - -
Aip01g02919 211 MobiDBLite consensus disorder prediction 1 32 - -
Aip01g02919 211 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 143 191 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02919 Aip-Chr1 131182322 131183504 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02919 37 195 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06590 58.857 1.96e-50 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02919 - - gmx:100803765 223.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02919 01 131182322 131183504 Aip01g02919 01 131182322 131183504 ECH
Aip01g02919 01 131182322 131183504 Aip04g00992 04 13971124 13972347 PCT