Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02915 ATGCTTCAGGCATTCATGAATCTACGCGCTCTCTGTTTGAGGCCATTCGGGCTCGCTGACGACAAGGTCGACACTTCCCCCGTCGAAGTCAACGGCGGCAGCTTCAGAGGCAGCGGAAGCTTCAAAGGCGGCGGCGGCGCAAGAGAAGGCAAGGACAGCCTCCTCTGGTCTCGCGACGTCGGAAAATATGGCTCCGGCGATTTCTCCATGGCCGTCGTCCAGGCCAATCAGGTCCTTGAAGACCAGAGCCAGATAGAGTCCGGTCCCCTTGGCACCTTTGTTGGCATCTACGACGGTCACGGAGGACCCGACGCCGCGCGATTCGTATGCGATCACCTCTTTCGCCATTTTCAAGCAATATCAGCTGAAACAAATGGAGGCGTGATCACTGAGACCATCGAGAGGGCATTCCGCCAAACAGAAGAAGGGTATGCTGCTCTTGTGTCAGACTTGTGGAGCACTCGGCCTCAAGTCGCAAGCGCCGGGACTTGTTGTCTGGTTGGAGTGATATTTCAGCAGACACTCTTTGTGGCAAACCTTGGAGACTCCCGCGTTGTATTGGGTAAGAAAGTTGGCAACACAGGAGGCGTTGCTGCAATTCAGCTTTCTACAGAACACAATGCAAATGTTGAAGCTGTGCGGCAGGAGCTTAAAGAGTTACACCCACATGATCCCCAGATTGTTGTCCTCAAACATGGAGTGTGGAGAGTCAAAGGCATTATTCAGATTTCTAGATCTATAGGTGACGTATATATGAAAGATGCACAATTTAACCGGGAACCACTTCCTGCAAAATTCAGACTTCCTGAACCCATGCACATGCCTATCTTGAGTGCTGAACCCGCTATTATTTCTCATCGACTGCAACCAAATGATTCTTTCATTATATTTGCATCAGATGGCTTATGGGAGCACCTGAGCAATGAAAAGGCTGTGGAAATTGTTAGCAGCAATCCACACACGTCTGTAGTGTGTGGTTCATGTGATCCGGAGACCATAATGCACAGGACATAA 1014 0.5049 MLQAFMNLRALCLRPFGLADDKVDTSPVEVNGGSFRGSGSFKGGGGAREGKDSLLWSRDVGKYGSGDFSMAVVQANQVLEDQSQIESGPLGTFVGIYDGHGGPDAARFVCDHLFRHFQAISAETNGGVITETIERAFRQTEEGYAALVSDLWSTRPQVASAGTCCLVGVIFQQTLFVANLGDSRVVLGKKVGNTGGVAAIQLSTEHNANVEAVRQELKELHPHDPQIVVLKHGVWRVKGIIQISRSIGDVYMKDAQFNREPLPAKFRLPEPMHMPILSAEPAIISHRLQPNDSFIIFASDGLWEHLSNEKAVEIVSSNPHTSVVCGSCDPETIMHRT 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02915 337 Pfam Protein phosphatase 2C 91 318 IPR001932 -
Aip01g02915 337 Gene3D - 55 330 IPR036457 -
Aip01g02915 337 PANTHER ALPHABET, ISOFORM E-RELATED 4 321 - -
Aip01g02915 337 CDD PP2Cc 68 322 IPR001932 -
Aip01g02915 337 ProSitePatterns PPM-type phosphatase domain signature. 93 101 IPR000222 GO:0043169
Aip01g02915 337 ProSiteProfiles PPM-type phosphatase domain profile. 67 337 IPR001932 -
Aip01g02915 337 SUPERFAMILY PP2C-like 77 321 IPR036457 -
Aip01g02915 337 PANTHER PROTEIN PHOSPHATASE 2C 42-RELATED 4 321 - -
Aip01g02915 337 SMART PP2C_4 54 336 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02915 Aip-Chr1 131113607 131116917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02915 1 319 PP2C-type Phosphatase Gene Family AT3G17090 67.085 2.66e-150 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02915 K01102 - gmx:100790813 514.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02915 01 131113607 131116917 Aip01g02915 01 131113607 131116917 ECH
Aip01g02915 01 131113607 131116917 Aip04g00993 04 14008567 14011721 PCT