Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02903 atgccaaagtcagcaaagggagcaaaacagGTGGAGCATCGGGCTTTCACCCCCGAAGAGAATGGCACCATAATCAGAGCTCACGCTCGGTTCGACAACAAGTGGGCCACCATAGCCCTACTCTTTTTCGGCAGAACCGACAATGCCATTAAGAACCACTGGAACTCCACCCTCAAACGCAAGTGCGCCTCCATGGACCCCATCGACGATCCTCACTTCGCACAGCCACTCAAATGTTCTATTAGCGCCGGCGCCGCCATACTCGTGTCAACGGTGGTGGTGAGGTACTCGTTGCCAACGGTGATGGCGACGACGGATATGGCGGGCAGGAAGGGGAGGATGCGGATGGAGAGCCAGGAGTGTGCAGTGGAAATGTCAGAGCTGATGTTGGCGACGCGGGAGTTCTCGAGGGAGACAATGAAATCAATGGTAAAAGTTTGGAGGATTCAGGAAAAAACCCAATCCATTCAGGTGGTGAAGTTAACAGCAATGATGGCTGATGGTGATGGTGGTGGTGGTGCTGTTGAGTCGCGATCGACATCGATGGGGGAGTGTGCGGTCGAAAGGGTTAGGGTGACGGCTGAGGAGGAGGGTGAGACGGTAGTATTGAGCAGTAATGTGGTTGATGTTGGGATTGGGTCGCTCAGAACATTgagagagacaggaggagggaggagatga 681 0.4963 MPKSAKGAKQVEHRAFTPEENGTIIRAHARFDNKWATIALLFFGRTDNAIKNHWNSTLKRKCASMDPIDDPHFAQPLKCSISAGAAILVSTVVVRYSLPTVMATTDMAGRKGRMRMESQECAVEMSELMLATREFSRETMKSMVKVWRIQEKTQSIQVVKLTAMMADGDGGGGAVESRSTSMGECAVERVRVTAEEEGETVVLSSNVVDVGIGSLRTLRETGGGRR 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02903 226 Pfam Myb-like DNA-binding domain 15 57 IPR001005 -
Aip01g02903 226 CDD SANT 15 58 IPR001005 -
Aip01g02903 226 ProSiteProfiles Myb-like domain profile. 8 58 IPR001005 -
Aip01g02903 226 PANTHER TRANSCRIPTION FACTOR MYB73 10 105 - -
Aip01g02903 226 SUPERFAMILY Homeodomain-like 11 63 IPR009057 -
Aip01g02903 226 PANTHER MYB PROTEIN-RELATED 10 105 - -
Aip01g02903 226 SMART sant 12 60 IPR001005 -
Aip01g02903 226 Gene3D - 15 74 - -
Aip01g02903 226 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 13 62 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02903 Aip-Chr1 130956768 130958448 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02903 8 106 MYB Transcription Factor Family AT5G67300 52.475 7.23e-28 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aip01g02903 Myb_DNA-binding 1.2e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02903 K09422 - aip:107641435 167.162