Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02871 ATGGGAGTTGAAAAAGAGGGGACAAAAAGTGAAGGTGGGTATGTTGGTGGTCTTTTCCGGTTATTCGACTGGACCTCGAAATCACGGAAGAAGTTATTTGCAACCAAGTCAGATTTGCCAGGATCTTTGAAACAGAGAAGAAAAATTGATGGCAACTTGTCAATGATGCAGCCCTATCTGGCTGATGAAGATGAAATTGGAGTAGGAGCAAGTATTAGAAGTAGTGATCACAGTTATGCTTCATCTGTTACAGATGACGACATGTGCGGAACAAGGGCACCTAGTGTGGTTGCTAGGCTTATGGGATTGGATTCCTTGCCCTCTTCCAGTTTTCATGATCCATATTCTTCCCCATATTTTGATAGCCGATCTCTTCAAGATGTGCAGTACTGGAGGACTAATCTCAATCATCAGCATGGCCATCAGAACCTGTATTCCGGGAAGTTGGTTGAAAAGGTTGAGGGCTCTTCTAGAAACTTCATTGAGCCAAAGCCTCAGAACAACCTTAGCAGACCAATTGAGAAGTTTCAAAGTGAAGTAATGCCTCCCAAAGCGGCTAAAACAATTCCTGTCACACACCATAAACTTTTGTCCCCTATTAAGAGTCCTGGCTTTATTCCAACAAATAATGCTGCTTATATAATGGAGGCTGCTGCAAGAATTATTGAACCTAGCCCCCAAGCTACTACAAAGGCTAGAGCACACCTTGCATCATCATCATCAGTATCATTGAGAGTAAGAGATCTTAAAGAAAAAGCAGAGGCTTCACAGAAAGGTCCTCTAGTTGGGTCAACTTCAATGCCCCCTAGAATTAGAGATCTCAAAGAAAAAGGGGAAGTTTCTCATAGAACTAGCAGGATTTCTGAACCTTCTCAGAGGTCAGTTGAATCTAATTCTGTCAAGTATCTAAAGAGACAATCTTTGAACAAAAGCTGGAATGGGTCCGTGGATGCTCCCACCCGATCTTCTACCGAAGCAAAAGAAGATTCGTCTGTGAAGAATGCAGGGAAGTCTATTTCCCTTGCCATCCAAGCAAAAGTGAATGTTCAAAGAAGGGAAGGCTTGAACTCAAGTGGTGGAAGAAGTTTGGTGGATCAGAAAGAAGATTCTGATGCTAAAACTCACCAGCCTCTCAGGGCAAATGTTCAAAAAGGTTTGCATAAGAAGCCCTCTAGTCAGAACGCTTCTGGTGTTCTCAAGCAGAATAATCTGAAACAAAACCATTCAATTGAGAAAGATAAACAACCATCAAAGCAAATAGTTTCAAATTCACACCGTAGAAAATCTCTGATGGGGGACTCCGGGTGTCATAGAAGCTCTAGTAGTAAAACACCTGCAAAATCTAAAGTTGGTTCCAAAAAATCGGCCACACAGCTGACAGATAGTGAAAAGGAAGTTTTGTATACCCACACAAACAATTTCCCAAGAAAGAAGAGGTCCACAGATAGGGACTGGAATGATAGGGTTGTTGATAATTTGTTTATTGATAAAACTCAGAGGCCTGTTCAGTCTAGTCTAGTAAGTAATAAGCGCCATAGTGATGATGAAGTAAAAAAGAAAGACATGGATGTAGTTTCCTTCACCTTCACCACGCCGTTGGCGAGAAACAATTCCAGTTTTGAGACATCTGGAAAATCTGGCATGAAAACTGGTGTACTTCCCTTTGATCATCACATCAAAAGAGTGCTGCTTGACACAGACAATGCAAGGTCTCCCATTGGATACAATGTGATTGGTGGTGATGCATTAGGCATTCTTTTGGAACAGAAGTTGAGGGAATTGACAAATGGACTTGAGTACTCTTGTGATGACTCTTCTAAAGTGAGGCCATCTTCTAGTACAGGACCACAATCAAAAGATGTGGTGACCACGCCCGATTCAGTTAACTTCGTTCCACAGTTGCAACTGAAGAGGGACCAGGACCTGCTCTTAGCTGATAAGTTATGCGGAAGCCTTGATTCTGCAGTTTCCTTCACAGGTCTTCCTGAATTATCATCCAAACATAGACTATGGGGTGATAAGATGGAAGAGTGCAAGAGCAATCTTGTAGAACCACAGTCATTCAATTGTCGATTGCCAAGTCCAATCTCTGTTCTTGAGCCTTCATTTTCAGCAGAAACCTTTGAATCTTCATTCAGCACCGATGCTACTAGCACAGAAGGTAGCAAGTTGAGCTTATCTGCTCAAGCACAGGAAGTTCATGGTTTGAATTTCTCAGGGAAGTTCTATTCTGCAGAAGCTGATACAGAGTTGTGTGATTCAGCTTGTTCAACATCAACCAGGACCATGATGGTAAATAAGGAGCACACAAGCACAAGTGCATTATCAACCACATGGGAGTTGGATTATGTAAAAGAGATATTATGCAATGTTGAACAAATGTACATGGACTTCGCTTCCGGCCGTGCTCACAAAATTGTGAACCCTCATCTATTCAACCAGTTGGAAAGCCAGAGAGAAGCAGGGTATGAGAGTGATGGTGGAGAATGTAGGATAAGGAGGAAAGTGATATTTGATTGTGTGAGTGAATATTTGGACTTAAGATGCAGGCGTTCTGTTAATGGTGGATATGAAATGTGGGCCAAAGGGACTGAAATGGTGAGAAGAAATGAATGGTTGGCAAAGGAAGTGTACAAGGAAATTTCAAGCTGGAGAGGGATGGGAGATTCCATGGTGGATGAGCTTGTGGACAAGGATATGAGCCAACAATATGGAAGATGGCTAGATTTTGAACTTGATGCATTTGAACTTGGTGCAGAGGTTGAGGATCAGATACTGAATTCCTTGCTTGATGATGTTGTTGCTGATATCTTGCAATTATAA 2823 0.4201 MGVEKEGTKSEGGYVGGLFRLFDWTSKSRKKLFATKSDLPGSLKQRRKIDGNLSMMQPYLADEDEIGVGASIRSSDHSYASSVTDDDMCGTRAPSVVARLMGLDSLPSSSFHDPYSSPYFDSRSLQDVQYWRTNLNHQHGHQNLYSGKLVEKVEGSSRNFIEPKPQNNLSRPIEKFQSEVMPPKAAKTIPVTHHKLLSPIKSPGFIPTNNAAYIMEAAARIIEPSPQATTKARAHLASSSSVSLRVRDLKEKAEASQKGPLVGSTSMPPRIRDLKEKGEVSHRTSRISEPSQRSVESNSVKYLKRQSLNKSWNGSVDAPTRSSTEAKEDSSVKNAGKSISLAIQAKVNVQRREGLNSSGGRSLVDQKEDSDAKTHQPLRANVQKGLHKKPSSQNASGVLKQNNLKQNHSIEKDKQPSKQIVSNSHRRKSLMGDSGCHRSSSSKTPAKSKVGSKKSATQLTDSEKEVLYTHTNNFPRKKRSTDRDWNDRVVDNLFIDKTQRPVQSSLVSNKRHSDDEVKKKDMDVVSFTFTTPLARNNSSFETSGKSGMKTGVLPFDHHIKRVLLDTDNARSPIGYNVIGGDALGILLEQKLRELTNGLEYSCDDSSKVRPSSSTGPQSKDVVTTPDSVNFVPQLQLKRDQDLLLADKLCGSLDSAVSFTGLPELSSKHRLWGDKMEECKSNLVEPQSFNCRLPSPISVLEPSFSAETFESSFSTDATSTEGSKLSLSAQAQEVHGLNFSGKFYSAEADTELCDSACSTSTRTMMVNKEHTSTSALSTTWELDYVKEILCNVEQMYMDFASGRAHKIVNPHLFNQLESQREAGYESDGGECRIRRKVIFDCVSEYLDLRCRRSVNGGYEMWAKGTEMVRRNEWLAKEVYKEISSWRGMGDSMVDELVDKDMSQQYGRWLDFELDAFELGAEVEDQILNSLLDDVVADILQL 940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02871 940 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 1 938 - -
Aip01g02871 940 MobiDBLite consensus disorder prediction 422 469 - -
Aip01g02871 940 MobiDBLite consensus disorder prediction 230 335 - -
Aip01g02871 940 MobiDBLite consensus disorder prediction 352 482 - -
Aip01g02871 940 Pfam DUF761-associated sequence motif 81 111 IPR032795 -
Aip01g02871 940 MobiDBLite consensus disorder prediction 602 623 - -
Aip01g02871 940 MobiDBLite consensus disorder prediction 270 286 - -
Aip01g02871 940 MobiDBLite consensus disorder prediction 386 405 - -
Aip01g02871 940 MobiDBLite consensus disorder prediction 406 420 - -
Aip01g02871 940 Pfam Domain of unknown function (DUF4378) 780 932 IPR025486 -
Aip01g02871 940 MobiDBLite consensus disorder prediction 287 321 - -
Aip01g02871 940 PANTHER EXPRESSED PROTEIN 1 938 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02871 Aip-Chr1 130659951 130664461 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02871 16 938 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 31.329 6.51e-95 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02871 - - gmx:102660038 1256.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02871 01 130659951 130664461 Aip01g02871 01 130659951 130664461 ECH