Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02866 ATGTCTAATAGCATCAGCAAGGCTTTCAATTTTGCATTCAAAGGTTACTTCAAAAGCATTTTTGGGCAATCCAAAGAGAGAGATGGGTACATTAAGTGGTTTGCTGGAAATGTGGCTTCAGGAAGTGCCGCGGGAGCAACTACTTCACTGCTTCTTTATCATTTAGATTATGCACGAACACGATTGGGCACTGATGCATTGGAGTGTCGTGCTACCGGTCAGCGCCAGTTTAAGGGGCTAGTTGATGTGTACCGTAAAACCTTGTTAAGTGATGGAGTTGTTGGCTTATACAGGGGATTTGGGGTGTCAATAGTGGGAATCACAATGTACCGAGGGATGTACTTCGGGATCTATGACACCGTGAAGCCTATCATTTTAGTTGGGCCTTTCGAGGGAAATTTCTTTGCTAGTTTCTTCTTAGGTTGGAGCATTACAACATCAGCAGGGGTTTGTGCATACCCGTTTGACACACTGCGTCGGAGAATGATGCTAACATCTGGACAACCAAACAAGTATTATAACGCAAGGCATGCATTTCGTGAGATTGAGCTGGGGTGCTTGCTGGATATGATCAGCTCAACTGCTTCTCATCTAGGCACTAGTATGCAGAGGTATATAAAGCAGAACAATGACGTTGCTCTCTGTGCACCAGGGATGGGGGTGACCATACAGTAA 675 0.4504 MSNSISKAFNFAFKGYFKSIFGQSKERDGYIKWFAGNVASGSAAGATTSLLLYHLDYARTRLGTDALECRATGQRQFKGLVDVYRKTLLSDGVVGLYRGFGVSIVGITMYRGMYFGIYDTVKPIILVGPFEGNFFASFFLGWSITTSAGVCAYPFDTLRRRMMLTSGQPNKYYNARHAFREIELGCLLDMISSTASHLGTSMQRYIKQNNDVALCAPGMGVTIQ 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02866 224 SUPERFAMILY Mitochondrial carrier 3 182 IPR023395 -
Aip01g02866 224 Pfam Mitochondrial carrier protein 133 182 IPR018108 -
Aip01g02866 224 Pfam Mitochondrial carrier protein 33 125 IPR018108 -
Aip01g02866 224 PANTHER ADP,ATP CARRIER PROTEIN ER-ANT1 7 182 - -
Aip01g02866 224 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 7 182 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Aip01g02866 224 Gene3D Mitochondrial carrier domain 1 195 IPR023395 -
Aip01g02866 224 PRINTS Adenine nucleotide translocator signature 32 45 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Aip01g02866 224 PRINTS Adenine nucleotide translocator signature 137 153 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Aip01g02866 224 PRINTS Adenine nucleotide translocator signature 6 18 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Aip01g02866 224 ProSiteProfiles Solute carrier (Solcar) repeat profile. 32 124 IPR018108 -
Aip01g02866 224 PRINTS Mitochondrial carrier protein signature 47 65 IPR002067 GO:0055085
Aip01g02866 224 PRINTS Mitochondrial carrier protein signature 141 163 IPR002067 GO:0055085
Aip01g02866 224 PRINTS Mitochondrial carrier protein signature 97 115 IPR002067 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02866 Aip-Chr1 130618180 130621455 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02866 6 182 Antiporters AT5G17400 80.791 2.12e-104 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02866 K05863 - gmx:100776735 306.99