Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02864 ATGGCATCGCACTACTTCCTTAGCTGCTTTATCAGCAGCGTCGCCGTTCTATCCATCATATTGATTCAAACGACGCCGTTTTCTACGGCCCAGTCAGCATCCTGTAACGGCATACTCGTCTCCTACGCCTACACCGGCGGGACGCGCCTCCCGCCCAATGTCTCCGATGCGGCCAAGCAACCGTACCGGTTCGAGTCCACGCTCACTGTTCTCAACAACGGCCTCGACGACCTCAAGTCATGGAAGGTCTTCGTCAAGTTCCAGCACAATGAGTTCCTCGTCTCTGCCTCCGGCGCCGTCCTCGCCGACGGCACCACTCTCCCCGCCGCTGTCGGTAACGGCACCATCTTCGCTGGATATCCTATGACTGACCTCAAGACTGCGGTGGAAACCGCCGGCGACTTGACGCAGATGCAGGTCCAGATCGATCTCGTTGGCACTGTTTTTGGAGTGGCGCCGCCCACTGTTCCTCTTCCTTCCTCCATCAATCTCGCCAACGATGGATTCATCTGTAAGAAGCCAACTGGTCAAGGGAAGAATGTGAGTAATGTGTGTTGCACAAAGGATCCGAAGTTCAAAACGAACATAACCATAGATGATGAGTTCCTTCCCCGTCAAGATGGTGATCTATCAATCATGTATGATGTGATTAGAACTTATGATTCCAATTACTGGGCTGAGGTTACCATTGCAAACCATAACCCTCTAGGTCGTCTTGACAATTGGAAATTGAGCTGGGATTGGATGAATGATGAGTTCATATACTCAATGAAAGGGGCTTATCCTTATGTTGTGGATGCTTCTGATTGTGTCTTTGGTAAGCAAGGGACATTCTACAAGGAGCTTGACTTTGCCAATGTCTTGAATTGTGAGAGAAGGCCAACCATCATTGATCTTCCTCCCACCAAGTTCAACGATACGGATCTTGGTAAGATCCCTTTTTGCTGCAGGAATGGTACTATATTGCCGCCCTCGATGGACCCCAGCAAATCCGTTTCGAAATTTCAGATGCAGGTTTTCAAGATGCCGCCCGCTCTCAATCGCTCTCAGCTTTCCCCGCCACAGAACTGGAAGATAAATGGCACCCTCAACCCAACTTACAAGTGTGGCCCTCCCGTGAGAGTGAGTCCTAGTGAAAATCCGGATCCATCGGGCTTGCCGTCGAACAAGACAGTGATGGCAAGTTGGCAGGTTGTGTGCAACATAACGAAGCCCAAGGGAGCAACCAGCAAATGCTGTGTCTCATTTTCAGCATATTACAATGATTCGGTTATACCTTGCAAAACATGTGCCTGTGGATGCCCCAGTAACACTGCAAGAACATGTAGTACTACTGCACAGGCTATGTTCCTTCCACCAGAGGCACTTCTTGTTCCTTTTGATAACCGAACTGCGAAAGCTGTTGCTTGGGCTGATCTGAAGCATCTACCGGTTCCGAAACCAATGCCATGTAGTGACAACTGTGGTGTAAGCATTAACTGGCATGTATACACAGACTACACTAAAGGGTGGAGTGCAAGAGTCACTCTTTTCAACTGGGGTGACACTAATTTCGCAGATTGGTTTGCTGCAGTGCAAATGGATAAAGCAGCTGCAGGTTTTGAGAAAATGTATTCATTCAATGCAACCGCCCTAGACGGTGTAAACAATAATACCATATTGATGCAAGGTTTGCCAGGACTGAACTACCTTGTCGCGGAAGCAGATGGTGCCAACCCTCTTAACGATCCTAGGGTGCCTGGTAAACAACAATCAGTAATCTCATTCACCAAGAAAACTACCCCAGGAATTGATGTTGCTCATAGAGATGGGTTTCCCACTAAAGTGTTCTTCAATGGCGAGGAATGTTCACTTCCTTCGGTGTATCCAACGAGTAGTGGATTCAGGGAGGTCTTGTCCTGGAAAACTTCTATCGTTCTGTCTCTGTTGCTGGTTATCTTGATGCGGTAG 1950 0.4862 MASHYFLSCFISSVAVLSIILIQTTPFSTAQSASCNGILVSYAYTGGTRLPPNVSDAAKQPYRFESTLTVLNNGLDDLKSWKVFVKFQHNEFLVSASGAVLADGTTLPAAVGNGTIFAGYPMTDLKTAVETAGDLTQMQVQIDLVGTVFGVAPPTVPLPSSINLANDGFICKKPTGQGKNVSNVCCTKDPKFKTNITIDDEFLPRQDGDLSIMYDVIRTYDSNYWAEVTIANHNPLGRLDNWKLSWDWMNDEFIYSMKGAYPYVVDASDCVFGKQGTFYKELDFANVLNCERRPTIIDLPPTKFNDTDLGKIPFCCRNGTILPPSMDPSKSVSKFQMQVFKMPPALNRSQLSPPQNWKINGTLNPTYKCGPPVRVSPSENPDPSGLPSNKTVMASWQVVCNITKPKGATSKCCVSFSAYYNDSVIPCKTCACGCPSNTARTCSTTAQAMFLPPEALLVPFDNRTAKAVAWADLKHLPVPKPMPCSDNCGVSINWHVYTDYTKGWSARVTLFNWGDTNFADWFAAVQMDKAAAGFEKMYSFNATALDGVNNNTILMQGLPGLNYLVAEADGANPLNDPRVPGKQQSVISFTKKTTPGIDVAHRDGFPTKVFFNGEECSLPSVYPTSSGFREVLSWKTSIVLSLLLVILMR 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02864 649 Pfam COBRA-like protein 224 403 IPR006918 GO:0010215|GO:0031225
Aip01g02864 649 PANTHER COBRA-LIKE PROTEIN 7 8 648 - -
Aip01g02864 649 PANTHER COBRA-LIKE PROTEIN 7 8 648 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02864 Aip-Chr1 130612193 130614638 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02864 35 633 COBRA Gene Family AT4G16120 69.652 0.0 891
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02864 - - gmx:100803929 1131.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02864 01 130612193 130614638 Aip01g02864 01 130612193 130614638 ECH
Aip01g02864 01 130612193 130614638 Aip04g01059 04 15427388 15430445 PCT