Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02851 ATGGTTCTTTTCCAATCGTTTGTGAATGAATTGGCACGAAGTGTGTCCATCAAGAAAGAAAAGAAGTGTCAGAAAGATGATGATGGAAGAAGAGCTGTGAAAGAAATGGCAAAGGCAGCAAGGAAGAATGATTTGTTATTGAAATCATCTGGAGTTGTAAAGTCCACAAAGGCCAACAGCTTTGCTTCTGTGTTCACAAATAAGGGCCAGAAAGGAGTCAATCAAGATCGTGTCCTTGTTTGGGAGGAATTTGGTTGCCAAGGGGACATGATGTTATGTGGAATTTTTGATGGACATGGCCTTTGGGGACACTTAGTAGCCAAGAGGGTGAGGAAACTAGTACCAGCTTTTCTGCTATGCAATTGGCAAAAAAGTGTGGCTGCAACATCATCACTTCACTTGGATTTTAAGATGGAATCAGATGAATATATTCATGGATTTGATTTATGGAAGCAATCCTACTTAAAGTCATATGCTGCCATTGATCAAGATCTAAAGCAGCACACTGGGATTGATTCCTTTCGAAGTGGTACCACAGCTTTGACAATTATCAAACAGGGAAATTATCTGATTACAGCAAATCTAGGTGATTCTAGAGCTGTGTTGGCAACAACTTCAGAGGATGGAAAATTGATTCCAATTCAGCTAACAACAGACTTGAAACCAAATTTACCAGAGGAGGCGAATCGGATAATGGAATCAGGAGGGGAAGTGTTTTGTATGGAAGATGAAAAAGGAGTGTACAGAGCATGGATGCCTAATGGTAGATCACCAGGGTTTGCAATTTCAAGAGCTTTTGGTGACCATTGCATGAAGGATTTTGGATTAATATCTGTCCCAGAAGTCACACACACAAAACTCACCAAAAGGGATCAATTTGTAATATTGGCTTCAGATGGGGTATGGGATGTTATGTCAAATGAGGAAGCAGTGAAGATTGTGTGTTCTTCAGGGGGAGAAAGAGCAGCAGAAAGGGTAGTGAAACGTGCAATCCATGAATGGAAACGCAAGAGAAGTAGCATTGCTATGGATGATATGTCTGTCATTTGCCTCTTCTTTCATTCTCACTCTCTCTCATCAGCTTCCTCCCACTAA 1095 0.4091 MVLFQSFVNELARSVSIKKEKKCQKDDDGRRAVKEMAKAARKNDLLLKSSGVVKSTKANSFASVFTNKGQKGVNQDRVLVWEEFGCQGDMMLCGIFDGHGLWGHLVAKRVRKLVPAFLLCNWQKSVAATSSLHLDFKMESDEYIHGFDLWKQSYLKSYAAIDQDLKQHTGIDSFRSGTTALTIIKQGNYLITANLGDSRAVLATTSEDGKLIPIQLTTDLKPNLPEEANRIMESGGEVFCMEDEKGVYRAWMPNGRSPGFAISRAFGDHCMKDFGLISVPEVTHTKLTKRDQFVILASDGVWDVMSNEEAVKIVCSSGGERAAERVVKRAIHEWKRKRSSIAMDDMSVICLFFHSHSLSSASSH 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02851 364 Gene3D - 47 355 IPR036457 -
Aip01g02851 364 SMART PP2C_4 52 351 IPR001932 -
Aip01g02851 364 ProSiteProfiles PPM-type phosphatase domain profile. 61 353 IPR001932 -
Aip01g02851 364 PANTHER PROTEIN PHOSPHATASE 2C 41-RELATED 1 359 - -
Aip01g02851 364 CDD PP2Cc 61 353 IPR001932 -
Aip01g02851 364 SUPERFAMILY PP2C-like 55 354 IPR036457 -
Aip01g02851 364 Pfam Protein phosphatase 2C 138 331 IPR001932 -
Aip01g02851 364 PANTHER ALPHABET, ISOFORM E-RELATED 1 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02851 Aip-Chr1 130401435 130404366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02851 4 354 PP2C-type Phosphatase Gene Family AT3G05640 53.955 1.22e-142 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02851 - - gmx:100817397 564.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02851 01 130401435 130404366 Aip01g02851 01 130401435 130404366 ECH