Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02850 ATGGAATCGCGAATTGCCGGTGGCAGCAGCAGCAGCCACCAGTACCACCAAATTCAGCCGGAGGCTTCGACGTCGTCGTTCTGGCAACCGCCGGAGCCTAGTCGGATCTTCGATGAGTTGCCGGAAGCCACCATTATATCGGTGTCTCGGCCAGAGGCCGCCGACATTACCCCCGCTCTCCTATCTTACACCATTCTTTTTCGCTACAGACAGTTCAAGTGGCAGCTGGTGAAGAAAGCTTCCCAAGTGTTTTATTTACATTTTATGTTAAAGAAGCGCGCCTTTATTGAGGAAATTCATGAGAAGCAAGAGCATGTTAAAGACTGGCTTCAAAATCTAGGAATAGGAGACCTTGCAGCTATGGTGCACATTGATGATGAAGCTGACGATGAAGTCATGCCTTTAAATAATCATCATGATGAAAGTGTTAAAGAAAGAGATGTTCCATCTAGTGCTGCTCTACCAATTCTGCGGCCAGCTTTAGGAACACAAGAGACTACAGCAGACAGGGCAAAGATTGCGATGCAGGGGTATCTCAATCACTTTTTGGGAAATATAACTATTGTTAACTCGAGAGAGGTTTGCAAGTTTCTGGGGGTATCAAAGTTATCCTTTTTACCTGAATATGGTTCCAAGCTACATGAAGATTATGTGATGGTGATGCATCTCCCAAAATTTTCAAAGGATGATAATTCCAGAAAGTGTTGTTTGTCTGATTGTTTTAGTTGTTGTAATGATAACTGGCAAAAGGTTTGGGCAGTACTGAAACCTGGGTTCTTAGCACTGCTAGCAGATCCTTTTGATGTACAACCTTTGGACATTATTGCTTTTGATGTACTACCTTCCTCCGATGGGAATGTGGATCATCGTCAATCACTGGCACAAGAAATGAAGGATCGAAATCCCTTGCGCCATTCGTTTAAGGTAACTTGTGGAAACCGGTGTATTAGAGTTAGAGTAAAAAGTAGTGCTAAAGTTAAAGATTGGGTCACTGCAATTAATGATGCTGGACTCAAGCCCCCTGAAGGATGGTGTCATCCCCACCGCTATGGTTCTTATGCTCCTCCAAGAGGCTTGATCAAAGATGGAAGTCAGGCCCAATGGTTTGTAGATGGTCGTGCCGCATTTGAGGCAATTGCTTCTTCAATCAAGGATGCAAAATCAGAGATATTTATTTGTGGCTGGTGGTTGTGCCCAGAACTGTATCTAAAGCGCCCTTTTCATGCTCATGCTTCATCAAGGCTTGATAATTTGCTGGAAGCAAGAGCTAAGCAAGGGGTCCAGATTTTCGTTCTTATCTACAAAGAGGTAGCCCTTGCTTTGAAAATCAATAGTTCTTATAGCAGGAGAAAGCTTCTTAGCATTCACGAGAATGTGAGGGTATTACGCTATCCTGACCACTTTTCTACTGGTGTTTACCTGTGGTCGCATCATGAGAAACTTGTGATTGTTGACCACCAGATTTGCTTTATTGGAGGACTGGATTTGTGCTTTGGTCGTTATGACACCCCTGAACATAAAGTTGGGGATCTCCCTCCTATTATCTGGCCAGGAAAGGACTATTATAATCCAAGGGAATCTGAACCAAATTCATGGGAAGATATGATGAAAGATGAATTGGACCGTGGAAAATACCCGCGTATGCCTTGGCATGATGTTCATTGTGCACTTTGGGGGCCCCCTTGTCGTGACATAGCGAGGCACTTTGTTCAGAGATGGAATTTTGCCAAGAGGAACAAAGCTCCAAATGAGCAAGCGATACCATTACTTATGCCTCGGCATCATATGGTTATTCCACATTACTTGGGAAAGGACACAGAGGTGAAGATTGAATACAAGAATAATGACAACAACAGAACCATGATGAGGGAAGACTCCTTTAGCTCAGCAACTGATGATATTCCTTTACTATTGCCTCGGGAGTCTGGTGGGCTCAATACTTCTGAAGAAGACCCCAAAAGTGGGTCAAGCTCATTTTCATATCTGCGTGACCAGACTGCTAGTAGGCTCAGCAGCGGTCTTTCTTTCTCTTTATGGAAGACCAGAGTTGAACCACTTAGTTCTGATACACCAATGAAGGGATTTGTAGACAATCTTGATGGTGTGCAAGTGCGTCATCAAAGGAAAATGTCTCTAGATAGAGTATCTCTTGGTGATGTCCAGAATTCAGATCAAGAGTGGTGGAAAACACCAGGACCTGGTGAGCATGGAGGTTTTGCAGAAGACTCTGGACAAGTTGGCCCTCGTGTTTCGTGTCGTTGTCAGGTTATTAGGAGTGTCACTCAATGGTCAGCTGGAACAAGCCAAACCGAAGAAAGCATCCACAAGGCATATTGCTCTCTAATTGAGAAGGCAGAATATTTCATCTACATTGAGAATCAATTTTTTATCTCAGGTCTTTCACGGGATGATGTAATACGAAATCGTGTATCAGAAGCTTTATATCAACGCATTAGGCGAGCTTACGACGATAAGAAAACTTTCAGGGTTATAATTGTCATACCTCTCCTTCCTGGCTTCCAGGGGGGCCTGGACGACAGTGGTGCAGCCTCTGTGAGAGCCATAATGCATTGGCAGTATAGAACTATCTGCCGAGGACAGAATTCTATATTACATAATTTGTATGAACTTCTTGGTTCAAAAATGCATGACTATATCTCTTTCTTCGGCCTCAGGGCACATGGTAGACTTTGTGAAAGTGTTCCCTTGGTAACCAGCCAGATCTATGTTCACAGCAAAATCATGATTATTGATGATTGTACATGTTTGATTGGATCTGCTAATATTAATGATAGGAGTTTACTTGGCTCCAGAGATTCTGAGATTGGTGTAGTTATAGAAGACAGAGAACTGATTGATTCCTATATGGATGGAAAGCCTTGGAAGGCAGGAAAATTCTCCTTGACTCTCCGATTGTCACTATGGTCTGAGCATTTAGGTCTTGGAGCAGGAGAGGCCAATCAAATAATGGATCCAGTTGTTGAGTCTACCTACAATGACATTTGGTTGGCAAGAGCAAAGGAAAATACTAAAATTTACCAGGATGTCTTTTCTTGTGTTCCTAATGATGTGATACACAACAGATATGCTTTCCGACAAAGCGTTGCTTTTTGGAAAGACAAGATAGGTCACAGTACTATTGATCTAGGGATAGCTCCAAAAAAGTTAGAAAATCATCATGACGGAGTTACTGAGAGCATTGATCCCATGGAGAGGTTAGCGTCAGTGAAAGGTCACCTTGTTAGTTTCCCCCTGGAGTTCATGAGCTTAGAAAATCTAAGACCTGCTTTCAATGAAGGCGAGTTCTATGCTGCCCAAGTTTTCCATTGA 3330 0.4306 MESRIAGGSSSSHQYHQIQPEASTSSFWQPPEPSRIFDELPEATIISVSRPEAADITPALLSYTILFRYRQFKWQLVKKASQVFYLHFMLKKRAFIEEIHEKQEHVKDWLQNLGIGDLAAMVHIDDEADDEVMPLNNHHDESVKERDVPSSAALPILRPALGTQETTADRAKIAMQGYLNHFLGNITIVNSREVCKFLGVSKLSFLPEYGSKLHEDYVMVMHLPKFSKDDNSRKCCLSDCFSCCNDNWQKVWAVLKPGFLALLADPFDVQPLDIIAFDVLPSSDGNVDHRQSLAQEMKDRNPLRHSFKVTCGNRCIRVRVKSSAKVKDWVTAINDAGLKPPEGWCHPHRYGSYAPPRGLIKDGSQAQWFVDGRAAFEAIASSIKDAKSEIFICGWWLCPELYLKRPFHAHASSRLDNLLEARAKQGVQIFVLIYKEVALALKINSSYSRRKLLSIHENVRVLRYPDHFSTGVYLWSHHEKLVIVDHQICFIGGLDLCFGRYDTPEHKVGDLPPIIWPGKDYYNPRESEPNSWEDMMKDELDRGKYPRMPWHDVHCALWGPPCRDIARHFVQRWNFAKRNKAPNEQAIPLLMPRHHMVIPHYLGKDTEVKIEYKNNDNNRTMMREDSFSSATDDIPLLLPRESGGLNTSEEDPKSGSSSFSYLRDQTASRLSSGLSFSLWKTRVEPLSSDTPMKGFVDNLDGVQVRHQRKMSLDRVSLGDVQNSDQEWWKTPGPGEHGGFAEDSGQVGPRVSCRCQVIRSVTQWSAGTSQTEESIHKAYCSLIEKAEYFIYIENQFFISGLSRDDVIRNRVSEALYQRIRRAYDDKKTFRVIIVIPLLPGFQGGLDDSGAASVRAIMHWQYRTICRGQNSILHNLYELLGSKMHDYISFFGLRAHGRLCESVPLVTSQIYVHSKIMIIDDCTCLIGSANINDRSLLGSRDSEIGVVIEDRELIDSYMDGKPWKAGKFSLTLRLSLWSEHLGLGAGEANQIMDPVVESTYNDIWLARAKENTKIYQDVFSCVPNDVIHNRYAFRQSVAFWKDKIGHSTIDLGIAPKKLENHHDGVTESIDPMERLASVKGHLVSFPLEFMSLENLRPAFNEGEFYAAQVFH 1109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02850 1109 Gene3D - 228 339 IPR011993 -
Aip01g02850 1109 SUPERFAMILY PH domain-like 244 336 - -
Aip01g02850 1109 Pfam PLD-like domain 779 955 IPR025202 -
Aip01g02850 1109 SMART PH_update 212 340 IPR001849 -
Aip01g02850 1109 CDD PLDc_vPLD1_2_yPLD_like_2 766 950 - -
Aip01g02850 1109 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 473 500 IPR001736 GO:0003824
Aip01g02850 1109 Gene3D Endonuclease Chain A 359 614 - -
Aip01g02850 1109 PANTHER PHOSPHOLIPASE 25 1106 - -
Aip01g02850 1109 MobiDBLite consensus disorder prediction 638 660 - -
Aip01g02850 1109 PANTHER PHOSPHOLIPASE D 25 1106 IPR015679 -
Aip01g02850 1109 CDD PH_PLD 189 336 - -
Aip01g02850 1109 PIRSF PLD_euk 679 1109 IPR016555 GO:0004630|GO:0006654|GO:0048017
Aip01g02850 1109 PIRSF PLD_euk 49 623 IPR016555 GO:0004630|GO:0006654|GO:0048017
Aip01g02850 1109 Pfam Phospholipase D Active site motif 473 500 IPR001736 GO:0003824
Aip01g02850 1109 SUPERFAMILY Phospholipase D/nuclease 329 593 - -
Aip01g02850 1109 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 906 933 IPR001736 GO:0003824
Aip01g02850 1109 SMART pld_4 906 933 IPR001736 GO:0003824
Aip01g02850 1109 SMART pld_4 473 500 IPR001736 GO:0003824
Aip01g02850 1109 SUPERFAMILY Phospholipase D/nuclease 726 980 - -
Aip01g02850 1109 CDD PLDc_vPLD1_2_yPLD_like_1 366 511 - -
Aip01g02850 1109 Gene3D Endonuclease Chain A 739 966 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02850 Aip-Chr1 130378402 130387258 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02850 9 986 Phospholipase D Gene Family (Wang group) AT3G16785 68.687 0.0 1317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02850 K01115 - gmx:100780514 1775.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02850 01 130378402 130387258 Aip01g02850 01 130378402 130387258 ECH