Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02848 ATGAATTCCAACCAAAACAAATCATCCCCTCTTTCACTCAACAACTACAATTTCGATTTCGATCTCGGCATCGGATCCAATCGCCCCAAATCCCTCAACGACCAGAAAACCCCCAATTCCTCCGCCCCTTCTTACTCCTCCTATTCTTATTCCTCCACCGCCACTTCCTCTTCCCAACCGAGGCCCTCCTGGCAACCCAACAAACCTGCATGGTCCCACAAGCCCGCCTCCGCTCCTGCCACTCAAACTGGGTTGCCCGGTGGTCCCCCTTCCATGGTCGGTGACATCTTCGGCAAGTCATGGGGTTCCACCCAACCTTCCGCTTCTGCCTCCGCCTCCGCCTCCACCGTCGGCATAGCTAACAAAAACCCTAACCTTTTCGGAGACCTGGTCACCTCTGCGCTTGGCCAAGGTCCCAGGAGCTCTTCCAATGTTCCTCTCAAAAACGCAACCCCTGCTTCCAAGCCTTCAGCTCCCGCCACTTCCACCTTTTCCATGGGAAAAATGGAAGATTCTTTGCCCAAAACTGCTAACACCGCACAGAGTAGTACAAATTGGGGATCTTCTGCCAATTTAGGGGGTTCTAGTACCGGGTATGGTGGTACCAGTATGAATTCCAACAAAAGCCCGAATCTTGGGGGTCCTTCATTAAGCACTATGGGTGTTGGTGGTTCAGCTGGTAGTGGATTCAGTTCCAGTAACAATGATCCGTTTAGTTCTCTGTCTGGTATTGGATCAAAGCAATCTGGTGCTGCCAGTCTTAATTCAGCTGCTAAATCCCAAAAGAATGATTTGGGGGATGATGGTTTTGGAGATTTTCAGAATGCTTACAAGCCGACCTCTGCAGCTTCTGGTAATGTTGGAATTGACATTGATTTTGGTGGATCTGCCACCTCGAATCAGACCCCAGTCCAGGGATCTGCTGGTGGTGCTGATCCAATGGACATGTTTTTCTCATCTTCCTCAGCATCTGCCGGAGGCACTGCTGCGGCTACGTCTCAAGGATTTGGAGGACAGGCATCTGCAGAAGTGGAAGATTGGGGTCTGGATTCTGAGTTTGGTGGAGGAGGGCATGATGTGGGTGGCACAACCACTGAGCTTGAAGGGCTTCCCCCACCTCCTGCCGGGGTGTCTGGTGCCGCTGCCAAAAACAAGGGGATGGACAATTACAAGCAGGGCCAGTTTGCTGATGCTATCAAGTGGCTTTCCTGGGCCGTCATCCTTCTGGAGAAAGCCGGGGATAACGCAGGCTCTGTGGAGGTTTTGTCATGCAGGGCTTCCTGTTACAAAGAAGTTGGGGAGTATAAGAAGGCAGTGGCAGATTGTACAAAGGTTCTAGAAAATGATGAGAAAAATGTGTCCGTCCTTGTACAGCGTGCTCTCTTGTATGAGAGTATGGAGAAGTACAGACTTGGTGCTGAAGACCTGAGGACTGTGCTAAAGATTGATCCTGGGAACAGAGTTGCCAGAAGTACTGTTCACCGATTGGCTAAGATGGCCGATTAG 1506 0.51 MNSNQNKSSPLSLNNYNFDFDLGIGSNRPKSLNDQKTPNSSAPSYSSYSYSSTATSSSQPRPSWQPNKPAWSHKPASAPATQTGLPGGPPSMVGDIFGKSWGSTQPSASASASASTVGIANKNPNLFGDLVTSALGQGPRSSSNVPLKNATPASKPSAPATSTFSMGKMEDSLPKTANTAQSSTNWGSSANLGGSSTGYGGTSMNSNKSPNLGGPSLSTMGVGGSAGSGFSSSNNDPFSSLSGIGSKQSGAASLNSAAKSQKNDLGDDGFGDFQNAYKPTSAASGNVGIDIDFGGSATSNQTPVQGSAGGADPMDMFFSSSSASAGGTAAATSQGFGGQASAEVEDWGLDSEFGGGGHDVGGTTTELEGLPPPPAGVSGAAAKNKGMDNYKQGQFADAIKWLSWAVILLEKAGDNAGSVEVLSCRASCYKEVGEYKKAVADCTKVLENDEKNVSVLVQRALLYESMEKYRLGAEDLRTVLKIDPGNRVARSTVHRLAKMAD 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02848 501 MobiDBLite consensus disorder prediction 132 266 - -
Aip01g02848 501 MobiDBLite consensus disorder prediction 28 66 - -
Aip01g02848 501 PANTHER OS03G0340700 PROTEIN 1 501 - -
Aip01g02848 501 Gene3D Tetratricopeptide repeat domain 378 500 IPR011990 GO:0005515
Aip01g02848 501 SUPERFAMILY TPR-like 381 491 IPR011990 GO:0005515
Aip01g02848 501 SMART tpr_5 379 412 IPR019734 GO:0005515
Aip01g02848 501 SMART tpr_5 453 486 IPR019734 GO:0005515
Aip01g02848 501 SMART tpr_5 419 452 IPR019734 GO:0005515
Aip01g02848 501 MobiDBLite consensus disorder prediction 1 21 - -
Aip01g02848 501 MobiDBLite consensus disorder prediction 360 383 - -
Aip01g02848 501 MobiDBLite consensus disorder prediction 132 262 - -
Aip01g02848 501 Pfam Tetratricopeptide repeat 426 452 IPR019734 GO:0005515
Aip01g02848 501 MobiDBLite consensus disorder prediction 294 315 - -
Aip01g02848 501 MobiDBLite consensus disorder prediction 1 109 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02848 394 496 Calmodulin-binding Proteins AT3G25230 31.132 6.99e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02848 - - pvu:PHAVU_003G107800g 561.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02848 01 130369499 130372318 Aip01g02848 01 130369499 130372318 ECH