Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02809 ATGCTTACTCCTGAAGGAGAAATAAAAATAAGTTTTGGCTATCAGTGCAACAATATTGAAAGAGGTGGCATCCCTTGTGAGGTGGCAAATCGCCACAACATCCTTCCTGAAGTCCGTAGGACAAGCAGTTTCTCATGCTTGTCAGGTGCGGCCTTAAGCGCAAACGCTACACTCGCCAACACAAACCTCTGCAATGGTAAGATAGGAGGTGAAATTCTTCCAAGTTGGGACTCTCCTAATTCATTTCGCAAGGTGCCCTCTTCACCAAGTCTTTCAAAGCTGGAAAGGCTATCATCTTCTCTGCCAAGTAGTTTATCTTACCTAAGTTGTAGTCCTTCCACCTCAAGTGATATACTAGAATATGACCCCTGCACATTCAAGTCCATGAGCGATCCTACCAGAACTGAAGGTTTTCTTAATGCTACCGAACTACAAGTGGCGGGAGGAGCTGCTGGTGAAGATAGAGTTCAAGCGGTATGTTCTGAAGAGAACGGATGGCTCTTTTGTGCAATTTATGATGGCTTTAATGGTAGAGATGCAGCTGACTTTCTGGCTGGTACACTCTATGATACCATCATATCTCACTTGAACAAGTTATTTTGGGAATTTGAGCCAGTTTCCATGGTAGAATCTGAAAATTTGATAAGTTTGGGTGGATCCCCTCAATATAACTTAGAGCAGAACCACAGCCTTATTTGTGATGCAGACCGATCCCTTTCACACAGGGTACTTGATAGCCTCCAATGTGCTCTTACTCAAGCTGAGAATGATTTCTTGTACATGGTTGAGCAGGAAATGGAGGATCGTCCAGATTTAGTTTCAATTGGATCTTGTGTTTTAGTTGTGCTTCTTCATGGTAATGATTTGTATACACTTAATCTAGGTGACAGCAGAGCAGTATTGGCAACATGCAGTCATGGCGATGGAAGACTCAAGGCTATCCAGCTTACTGATAGCCATACCGTCGACAATGAAGCCGAAAGAGCTACACTTGTAGCCAATCATCTTGATGATCCCAAGGTTGTTGTAGCAGGAAAGGTGAAAGGGAAGCTCAAGGTTACTCGCGCCTTTGGAGTCGGCTACTTGAAAAAAAGAAATCTCAATGATGCTTTGATGGGAATCCTTCGAGGAGTGATGGTTTATTCGACTTCTTCAGCAACGTTGAGGCAGTAA 1173 0.4356 MLTPEGEIKISFGYQCNNIERGGIPCEVANRHNILPEVRRTSSFSCLSGAALSANATLANTNLCNGKIGGEILPSWDSPNSFRKVPSSPSLSKLERLSSSLPSSLSYLSCSPSTSSDILEYDPCTFKSMSDPTRTEGFLNATELQVAGGAAGEDRVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTLYDTIISHLNKLFWEFEPVSMVESENLISLGGSPQYNLEQNHSLICDADRSLSHRVLDSLQCALTQAENDFLYMVEQEMEDRPDLVSIGSCVLVVLLHGNDLYTLNLGDSRAVLATCSHGDGRLKAIQLTDSHTVDNEAERATLVANHLDDPKVVVAGKVKGKLKVTRAFGVGYLKKRNLNDALMGILRGVMVYSTSSATLRQ 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02809 390 PANTHER PROTEIN PHOSPHATASE 2C 2 382 IPR015655 GO:0004722|GO:0006470
Aip01g02809 390 CDD PP2Cc 151 364 IPR001932 -
Aip01g02809 390 SMART PP2C_4 129 380 IPR001932 -
Aip01g02809 390 SUPERFAMILY PP2C-like 152 363 IPR036457 -
Aip01g02809 390 Gene3D - 105 382 IPR036457 -
Aip01g02809 390 ProSiteProfiles PPM-type phosphatase domain profile. 138 390 IPR001932 -
Aip01g02809 390 Pfam Protein phosphatase 2C 161 364 IPR001932 -
Aip01g02809 390 PANTHER PROTEIN PHOSPHATASE 2C 40-RELATED 2 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02809 Aip-Chr1 129758588 129759933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02809 4 376 PP2C-type Phosphatase Gene Family AT3G16560 63.089 9.70e-143 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02809 - - adu:107464162 681.019
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02809 01 129758588 129759933 Aip04g01155 04 17898451 17900242 PCT