Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02793 ATGGCCCCTTCCAAAAAATCCAAAAGTGTAAATAAGAGGTTTCCTAATGTTCGTGAAGCTGCTTCGAGTAAAGAGAAAAATGCAGAAAATGCTAGCAAGAATAAGCAGAAGGCAAGTCCTGGCGCTCAGAAGAAGAGAAAATTGGCTGACATGTTAGGGCCACAATGGAGCAAGGAGGAACTTGAGCATTTCTATGAAGCTTACCGTAAATATGGAAAAGACTGGAAGAAGGTTTCTCTTGCAGTACGTAATAGATCCGTGGAAATGGTAGAAGCTTTGTACACAATGAACAGGGCATACTTATCTCTTCCAGAGGGCACTGCTTCTGTTGTTGGACTGATAGCAATGATGACGGATCATTATAGTGTACTGGGAGGAAGTGACAGTGAAAAGGAGAGCAATGAAGATGCAGAAGTATCTAAAAGGTCTCAAAAACGTTTGCGAAGAAAACAAATGAATGACCATAAAACATTAGAGGGACCCTTTTCAGATCATTCTCAATCACAATCTGTTGCATCAGGTGATGGTTGCTTGTTGCTGTTGAAGACTAGGAATTCTGGGCTTACTCCTCATGCTGTCAGAAAACGGACTCCTCGAGTACCTATTTCACATTCCATTGGTAAAGATAATGCAGAGAAGTTATTTTCATCTGCCAGACAGGGGCGCAAACAAATGGTTGATACTAATGATGTTACTCATAAGATTGCATTAGCATTGGCCGAGGCTTCACAAAGAGGTGGCTCCTCAAAAATTTCTGCGTCTCCAAACAAGAGAGCAGCGCCATCGCCTAGTAAGAAAAGTGGGAAGAAGGTTAAATCAGAAATAGCTGGATCCAAGTTTTGCAGTTCTGATTTGGATGGGGGTAGCTCTGAATTGAGTTTAGGAAGCACAGAAGGAGACAATGGAGATTATTCTAGAAAAACAGTTAATTGGATAAGTAGGGAAAATACTGGAAAAGGAAGGAATCGAGAAAAGAGAGTAAAACACACTGGGAACAATTTAGAACCTGAGGAAAATTTAAACATGCATTTGGATGAGATAAAGGAAGCCTCAAGTGGGACAGATGATGGTAAAAATCTGAATTTTATCAAATCGAATTTTAGCACTGATTTTGCAAATGCAAAGAATCCAAGTCCCTCTTCTTACAAGGGTTCAAAGAAGAGAAGTAAAAAACTACAGGTTGAGAAAGATGAAGCTTCGGCTTTTGATGCTCTGAAAACTTTGGCTGATCTGTCTTTGATGATGCCTGTTACGAATGCTGACAGTGAGTCATCAGCACAGGTCAGAGAAGGAAACCATGATGTTGAGGAGTCTAAAGTGAAAATGCATAAGGCAACTAAGATTGAAAGAACTGCTTCAAGTGCATTAGGCAAGATCTTCTCTGATGGAGCTGCTATTCCTGAAGGGGAGGGTGTGTACCAGCTTAATGCAGGAATCAGGAAAAGGAAACAGAAATCTTTTAGCCTAAACAATGATGAAACACATACTGATTCTCACCTCAGTGGCTCCCAGAAAACCAAGGATACTGATGAGGTCAAGAAATCAATGGTTAAAGGTAAGCGATCATCTGTTTCTACAACATATCCAAGACAACCAAAGTTAGTTAAATCCCCGGGAAAGATGTCTTCAAGTGGTAATGACAAAAGAGAAGGGGATGATTCAACTTCATCTCCCATAAAGGTTTCATCTGCTAACCAAGTCGGTCAAGTAAACAAAGGAAGGCCTAGAAGAAAAATGGGAAAACCAAAACCAATGGTAGAAGGAGATCCAGTGTTGTCTGGAAATATTTTCAGTAGTCAGCATAATAAATCCTGTGCTTCGGTCCAGAATAGTTCCTCTAGCCCCAAGATGCCAATTTATTTTGTANNNNNNCATCAAGCACGGAGATGGTGCACTTTTGAATGGTTTTATAGTGCCATCGATTACCCATGGTTTTCAAAGAGGGAGTTCGTGGAGTACTTGGACCATGTTGGACTGGGTCATGTTCCTAGATTGACTCGTATTGAGTGGGGAGTCATTAGAAGTTCCCTTGGCAAACCGCGGAGATTTTCAGAGCAATTTTTGATAGAAGAAAAACAGAAGCTTAATCAATACCGAGAATCTGTTAGATCACATTATGCTGAAGTTCTTGCTGGTACCAAGGAAGGCCTTCCTACTGATTTGGCTCGGCCATTAATTGTTGGCCAGCGAGTTATTGCTATTCATCCGAAGACAAGAGAGATTCATAATGGAAGTATACTAACTGTTGACCATTGTCGGTGTCTGGTTCAGTTTGACCAGCGTGAACTCGGGGCTGAATTTGTTATGGATATAGATTGCATGCCTATGTATCCATTTGAAAATATGCCTACATCTATGGCAAGACACAACATTGCTCATTGTAGAATAAACGAGACCTTTAATGATCTCCGACTTAATGGAAAACTGAAACAAGAAATTATTGCTGATCACACAATATTGTCCCCTAGTGAGAATATAGATACTACTAAAGGTCTTCACATATTGCCCACTAAGCATGGAAGCAGTACTTTATCAAATCAGGGAGTTTCACCAAATTCCAAATCACAAGTGAAAGCTATGTGCAATCAGATTTGTAATGCTCAACAGGCACCAAGTTTGCAACCTTTGCCTTTTGAACATGTTCATTCAAAAGAAGCTGACATATCGGCTATTTCAGAGTTGACTCGCGCTCTTGACAAGAAGGAACTTGTGATGTCTGAACTGAAGGTCATGAACGATGGGGTTTCAGAAAGCCAGAAATATGGAGACAACTCATTGAAAGATTCAGAGCCTTTTAAGAGGAGTTATGCTTCACTGATAAAGCATTTAACTGAAGTTTCTTCTGCTTTGTTTCGCCTGAGGCAACGCAACACATATCAAGGGAGCACCACAGAATTATCACTAAAGCCCATAGCTAATTATGATGACCCTGGTGGTCAAGCTAGCTCCTCCAATTGTTCAGCATGTCATAACCAAGAATCTATACCTCTTGGCCATATAGCTGAAATTGTTGAAAGTTCTAGAAGAAAAGCCCGAGCAATGGTTGTTCAAGCTACACAGGCAATGTCAATATTTATGAAGACAGATAGTAAGGTTGAAAAGATCGAGGATGCAATAAATTTTATCAATAATCAGCTTTCAGTGGATGACCCTGCTGCTCCAGCCACAAATTCTCTGCCTGCTGATTCAATTCACGTCACTCTGGCTTCTCAGGATCAATTGACAGGAAACACATTAAATCCCTCAGTAAATTGTCATGCACAAGATGCCGAATTTAACAGTTCATCTGACCAAAATGAAATGAAAATTCCTTCAGAACTCATATCTCATTGTCTAGCTACACTGCTCATGATTCAGAAGTGCACGGAACGACAGTTTCCACCAGCTGATGTTGCTCAGGTACTAGATTCCGCTGTCACGAGTCTGCAGCCATTTTGCTCAAAGAACCTTCCAATATATGGGGAGATACAGAAATGCATGGGTATCATAAGAAACCAGATACTGGCACTCATACCAACTTAG 3522 0.406 MAPSKKSKSVNKRFPNVREAASSKEKNAENASKNKQKASPGAQKKRKLADMLGPQWSKEELEHFYEAYRKYGKDWKKVSLAVRNRSVEMVEALYTMNRAYLSLPEGTASVVGLIAMMTDHYSVLGGSDSEKESNEDAEVSKRSQKRLRRKQMNDHKTLEGPFSDHSQSQSVASGDGCLLLLKTRNSGLTPHAVRKRTPRVPISHSIGKDNAEKLFSSARQGRKQMVDTNDVTHKIALALAEASQRGGSSKISASPNKRAAPSPSKKSGKKVKSEIAGSKFCSSDLDGGSSELSLGSTEGDNGDYSRKTVNWISRENTGKGRNREKRVKHTGNNLEPEENLNMHLDEIKEASSGTDDGKNLNFIKSNFSTDFANAKNPSPSSYKGSKKRSKKLQVEKDEASAFDALKTLADLSLMMPVTNADSESSAQVREGNHDVEESKVKMHKATKIERTASSALGKIFSDGAAIPEGEGVYQLNAGIRKRKQKSFSLNNDETHTDSHLSGSQKTKDTDEVKKSMVKGKRSSVSTTYPRQPKLVKSPGKMSSSGNDKREGDDSTSSPIKVSSANQVGQVNKGRPRRKMGKPKPMVEGDPVLSGNIFSSQHNKSCASVQNSSSSPKMPIYFVXXHQARRWCTFEWFYSAIDYPWFSKREFVEYLDHVGLGHVPRLTRIEWGVIRSSLGKPRRFSEQFLIEEKQKLNQYRESVRSHYAEVLAGTKEGLPTDLARPLIVGQRVIAIHPKTREIHNGSILTVDHCRCLVQFDQRELGAEFVMDIDCMPMYPFENMPTSMARHNIAHCRINETFNDLRLNGKLKQEIIADHTILSPSENIDTTKGLHILPTKHGSSTLSNQGVSPNSKSQVKAMCNQICNAQQAPSLQPLPFEHVHSKEADISAISELTRALDKKELVMSELKVMNDGVSESQKYGDNSLKDSEPFKRSYASLIKHLTEVSSALFRLRQRNTYQGSTTELSLKPIANYDDPGGQASSSNCSACHNQESIPLGHIAEIVESSRRKARAMVVQATQAMSIFMKTDSKVEKIEDAINFINNQLSVDDPAAPATNSLPADSIHVTLASQDQLTGNTLNPSVNCHAQDAEFNSSSDQNEMKIPSELISHCLATLLMIQKCTERQFPPADVAQVLDSAVTSLQPFCSKNLPIYGEIQKCMGIIRNQILALIPT 1173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02793 1173 ProSiteProfiles SANT domain profile. 51 88 IPR017884 -
Aip01g02793 1173 SMART sant 52 100 IPR001005 -
Aip01g02793 1173 Gene3D - 3 108 - -
Aip01g02793 1173 MobiDBLite consensus disorder prediction 556 570 - -
Aip01g02793 1173 Pfam DIRP 635 736 IPR033471 -
Aip01g02793 1173 MobiDBLite consensus disorder prediction 485 518 - -
Aip01g02793 1173 MobiDBLite consensus disorder prediction 246 336 - -
Aip01g02793 1173 MobiDBLite consensus disorder prediction 484 598 - -
Aip01g02793 1173 SUPERFAMILY Homeodomain-like 52 99 IPR009057 -
Aip01g02793 1173 PANTHER PROTEIN ALWAYS EARLY 1-RELATED 1 1173 IPR028306 -
Aip01g02793 1173 CDD SANT 56 90 IPR001005 -
Aip01g02793 1173 MobiDBLite consensus disorder prediction 1 51 - -
Aip01g02793 1173 MobiDBLite consensus disorder prediction 283 316 - -
Aip01g02793 1173 PANTHER LIN-9 1 1173 IPR010561 GO:0006351|GO:0017053
Aip01g02793 1173 MobiDBLite consensus disorder prediction 125 143 - -
Aip01g02793 1173 Pfam Myb-like DNA-binding domain 55 90 IPR001005 -
Aip01g02793 1173 MobiDBLite consensus disorder prediction 519 542 - -
Aip01g02793 1173 SMART DIRP_2 636 737 IPR033471 -
Aip01g02793 1173 MobiDBLite consensus disorder prediction 317 336 - -
Aip01g02793 1173 MobiDBLite consensus disorder prediction 246 261 - -
Aip01g02793 1173 MobiDBLite consensus disorder prediction 18 32 - -
Aip01g02793 1173 MobiDBLite consensus disorder prediction 123 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02793 Aip-Chr1 129489366 129498436 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aip01g02793 DIRP 5.2e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02793 - - adu:107464346 2178.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02793 01 129489366 129498436 Aip01g02793 01 129489366 129498436 ECH