Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02787 ATGGAACGGAATTGTTCCCTCCGGCGAAAGACACAGAAAGAGAAGGAGGTGGTGGTCAAGAAGGTAATTTGGGCAGCTATCGAGGGGCATTCTTGTCCAATATGTTTTACCGATCTGGAATCTCGGTTCAGAGAAGCTGCGGTTCTGTCCCGCTGCTACCACGCTTACTGCACCCACTGCATCCGCCGTTGGAGTCACGTGCGCAGAGCGTGCCCTCTCTGCAATTCCGGTTTCGCCTTCTGGTTCTCCATCCTCAGCCTCTCTTCCAGAACCTTCCGGAAGCACTTCTTACCCTTCCACTCTCATTCTGATGCAAACCAACCGCCACGACTTCCCTCTACCAGGGCGAGGGTAGCGGTGACTAATGGACGAAGGAGGGCATTGCCCCGGAGAAGATCGTTTGGGCGTGCTGGACTTGTGAGTGCAGATGTTATTGCTCAGAGGAAGCTTCAATGGCGTGCTAGCATATACGATCAAAGATTGCAACCTGATTGTGCAACCCTAAGGTGTCTTGAGCGAGGATGCAAAGGCTGCGGTCCATGCAACTTGTTCCTTTCCATGGGGAATGGAAGAAGAAATGCTGTTAAAAGGGACATTCTACAACGGATTGAGCCATGGATAATGAGGGAGCTACAAGCTCTCTTAGGGGACCCAGATCCAACTGTCATTGTTCATGTGGCCACCTCACAGTTCATCACTTGGCTAGAAGAGAAGGCGAAATCGCCATCTCGCCACCTTCATGTGGGAGATACCTTCATTTCACCTCTTCGTCCCTTCCTACATGATAAAGCGACCATCTTTTGGCATGAGCTAAGTTGTTTCGCTGAGGGTTGTCACAACATGGATACCTACGATGAAGTTGTCGAATATAAACAACAGGAGTGGGTGGACAACACACATTAG 903 0.505 MERNCSLRRKTQKEKEVVVKKVIWAAIEGHSCPICFTDLESRFREAAVLSRCYHAYCTHCIRRWSHVRRACPLCNSGFAFWFSILSLSSRTFRKHFLPFHSHSDANQPPRLPSTRARVAVTNGRRRALPRRRSFGRAGLVSADVIAQRKLQWRASIYDQRLQPDCATLRCLERGCKGCGPCNLFLSMGNGRRNAVKRDILQRIEPWIMRELQALLGDPDPTVIVHVATSQFITWLEEKAKSPSRHLHVGDTFISPLRPFLHDKATIFWHELSCFAEGCHNMDTYDEVVEYKQQEWVDNTH 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02787 300 Pfam Ring finger domain 31 75 IPR001841 -
Aip01g02787 300 PANTHER TOPOISOMERASE I-BINDING, ARGININE/SERINE-RICH A-RELATED 26 298 - -
Aip01g02787 300 SMART ring_2 32 74 IPR001841 -
Aip01g02787 300 PANTHER E3 UBIQUITIN-PROTEIN LIGASE TOPORS 26 298 - -
Aip01g02787 300 ProSiteProfiles Zinc finger RING-type profile. 32 75 IPR001841 -
Aip01g02787 300 SUPERFAMILY RING/U-box 18 84 - -
Aip01g02787 300 ProSitePatterns Zinc finger RING-type signature. 52 61 IPR017907 -
Aip01g02787 300 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 6 80 IPR013083 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02787 21 272 C3H Transcription Factor Family AT2G39100 43.130 3.23e-60 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02787 - - adu:107464375 597.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02787 01 129383195 129384827 Aip01g02787 01 129383195 129384827 ECH