Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02783 ATGCTGGGATCTTGTCTCAAAAACCTGTTCTTGTACGACCTTACTGTCATCACAAGAACCCCATCAACCTCATTTCTGATCCCTTCACCTTCTTCCCCATTCCCTGCTCCCAATTACGCTACAGTCACAAAAACCCTGGAAAAACAATCCTTTACGGTGAATTACCTCGTGGAAAATTGTGGGTTCCTCCCAGATTCCGCTCTTCGTGCTTCCAAATACGTCCTTTTAAAGAGTCCCGAGAAACCCGACTCAGTCATCGCACTCTTCAGGAGCTTCGGTTTCACAGATTTGCAGTTTCACAATGTCATTCGGAGATCACCCAAGGTTCTCGTCAGCAAACCCAAAGAGACCATCTTGCCCAAGCTCGAGTTCCTCATCTCCAAAGGTGCTTCAAAATCCCAACTTGCCCGCATCATTGAGCTCAACCCTCTAATCTTGAAAAGAAGCTTAGAGAAACACCTGATCCCCACTTTCGATTTTTTGAACAATTTCATTCGTTCTGAAGAAAGGACCGTTGCTTCTATCTTACGCGCTGTCCGAATTTTAACTTATTCTAAGACGCTTCGAAATATTAACTTGTTGGTTGATTTAGGAGTCCGTGAGATAAGCATGTCATGGCTAATTCGCCAGTGGCCTTGCTTGCTTGTATTCAATTCTGAAGTTCGCCTCAAGAGTATAGTAGATGAAGTCATTAAAATGGGGGTTGATCCCAACAAGGCTAATTTTGTTGCTGCATTGTATGCTAAGTTTCTTCCAAAGTCCATGTGGGATAAGAAAGTTGAGTTGTACAAGAGTTTTGGATTAACTGATGACAACATTCGTGAGGCTTTTGTGAAGCACCCTTTCTGTATGCTGAAATCTGTGCAGAAAATTGAGGCCTGCGTTGGATTCTTTGTCAAAGAACTCGGTTGGGAGACTGCTGAAGTAACCAATAATCCGGTTCTTCTCTCGCTGGATTTGGACAAAAGGATTGTTCCGAGGGCTGCTGTCATGAAGATTCTTATCTCCAATGGTGTCATTAAGAGTGGCAGGCATGCTTCTGCATATTTTGTTTCTGAAGAGGAGTTTTTTAAGAAGTATGTTAATCGTGACAAGGATCATGCTCCCGACTTATTGACGCTGTATAATGAGAAAATGAATCTTCCAGTAATGGATAGTAAATTGATGTCTTGA 1173 0.4263 MLGSCLKNLFLYDLTVITRTPSTSFLIPSPSSPFPAPNYATVTKTLEKQSFTVNYLVENCGFLPDSALRASKYVLLKSPEKPDSVIALFRSFGFTDLQFHNVIRRSPKVLVSKPKETILPKLEFLISKGASKSQLARIIELNPLILKRSLEKHLIPTFDFLNNFIRSEERTVASILRAVRILTYSKTLRNINLLVDLGVREISMSWLIRQWPCLLVFNSEVRLKSIVDEVIKMGVDPNKANFVAALYAKFLPKSMWDKKVELYKSFGLTDDNIREAFVKHPFCMLKSVQKIEACVGFFVKELGWETAEVTNNPVLLSLDLDKRIVPRAAVMKILISNGVIKSGRHASAYFVSEEEFFKKYVNRDKDHAPDLLTLYNEKMNLPVMDSKLMS 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02783 390 Gene3D Transcription termination factor 3, mitochondrial 186 367 IPR038538 -
Aip01g02783 390 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED 46 381 - -
Aip01g02783 390 PANTHER CGI-12 PROTEIN-RELATED 46 381 IPR003690 GO:0003690|GO:0006355
Aip01g02783 390 Pfam mTERF 188 356 IPR003690 GO:0003690|GO:0006355
Aip01g02783 390 Pfam mTERF 87 204 IPR003690 GO:0003690|GO:0006355
Aip01g02783 390 SMART mt_12 172 200 IPR003690 GO:0003690|GO:0006355
Aip01g02783 390 SMART mt_12 274 305 IPR003690 GO:0003690|GO:0006355
Aip01g02783 390 SMART mt_12 100 131 IPR003690 GO:0003690|GO:0006355
Aip01g02783 390 SMART mt_12 136 167 IPR003690 GO:0003690|GO:0006355
Aip01g02783 390 SMART mt_12 205 236 IPR003690 GO:0003690|GO:0006355
Aip01g02783 390 SMART mt_12 306 340 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02783 Aip-Chr1 129332569 129333741 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Aip01g02783 mTERF 4.7e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02783 K15032 - csin:114308433 271.552