Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02754 ATGCCGTCGTACTTGTCATCGGAGGTATTTTCCGGTCATATTGATGCTCCAATGGATATATGGGCACTTGGCTGTATAGTAATTGAAATGCTAACTGAATTGCCTGCATGGGGTGAGAGCTTTTTGTCTACTGAAGAGTATTTGAGGTTCTTCATTGAGTATCTTGAACTATTACCAAAGAAGGCGAAAGGAATCAGTTTTTTCTGTTGTGATTTTCTAGAAAAGTGCTTTATAAAGGATCCTAGCAAGAGGTGGATTGCTGACATGCTTCTTGATCATCATTTTCTTTAG 291 0.3883 MPSYLSSEVFSGHIDAPMDIWALGCIVIEMLTELPAWGESFLSTEEYLRFFIEYLELLPKKAKGISFFCCDFLEKCFIKDPSKRWIADMLLDHHFL 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02754 96 Pfam Protein kinase domain 3 96 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g02754 96 Gene3D Transferase(Phosphotransferase) domain 1 1 96 - -
Aip01g02754 96 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 2 96 - -
Aip01g02754 96 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 20 2 96 - -
Aip01g02754 96 SUPERFAMILY Protein kinase-like (PK-like) 2 96 IPR011009 -
Aip01g02754 96 ProSiteProfiles Protein kinase domain profile. 1 96 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02754 Aip-Chr1 129063356 129063646 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02754 2 96 MAP Kinase Kinase Kinase AT3G50310 42.000 5.56e-17 72.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Aip01g02754 Pkinase 5.5e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02754 - - aip:107610915 161.77