Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02745 ATGATGTGGTCTGCTCCTCGTTCTGCTTTATCCGCCATGGCCCTTGAGCCACCGCCCTCTCCCCAACCTTCCTCTGCCACCAGCAATGATGGATTGCAAAGCAAACAAAGAGAGCAGAATGAAGCAAAGCAGAGATCAATAATAAGGTCTCTAAGGAGGCTAACTGCGCTATCAACAGGTTCACTTCCAGATGTGGAACCTCCAAGAAGTGAGGATGTCTCTGTATCTAGTATGAAGAGTTGTCCGAGTCCAGGATCCGAAAGCTCCTCTTCCAACACCGGTAGCCCTTCTAATTCCGGGGAGCAGTCGGATTTAAAAGGCAACAATAACAATAAAATGAATGGCATTGTTAGTATTCTGAAGAAAGGATCCCAGATGCCCCTCTATACCTTAACCTCAATCAAGGAGGCTCCGTATTTCAAAAAGAGAACCTCCGCCGAACGAATCCCAGAGGAATTTTCTGCAATTCTTAAACAAGGATCATCTCTTAATCCTGAGGCTTATCGCTTTAAAGCGTCCTGGAAATTATTCACTCTCGCAGATCTCCAGGCCGCGACCAATAATTTCAGCCAGGAGAATTTGATCGGGCAGGGAGGTTATGGTGAGGTTTACAAAGGCCAATTGGCAGATGGAACCTTTGTAGCAATTAAAAGGCTAACAAGAGGGGACCAAGAAGAAATGACTGCAGATTTTTTGTCCGAGCTTGGGATTATAGTGCATGTGGACCACCCCAATATTGCTAAATTGATTGGATATGGAGTTGAAGGTGGAATGCATCTTGTTCTTCAGTTGTCTCCACATGGCAGCCTAGCTTCCATACTATATGGACCTAGAGAGAAACTGAATTGGAACATGAGGTATAAGATTGCATTGGGGACTGCTGAAGGCCTCCACTATCTGCATGCACAATGTCAAAGAAGGATTATTCACAGAGATATCAAGGCTGCTAATATATTGCTTTCAGAGGATTTTGAGCCACAGATAGCTGATTTTGGACTATCTAAATGGTTACCTGACAAATGGACTCACCATACTGTCTCCAAAGTAGAAGGCACATTCGGTTACCTTCCTCCTGAATACTTCATGCATGGTATTGTTGATGAAAAAACTGATGTATTTGCTTATGGAGTGCTATTATTGGAGCTCATTACCGGCCGTCCGGCTTTGGACAAAGCTCAGAAAAGTCTTGTGATGTGGGCAAAACCACTGATATCCAAGAGCAAAATGGACGAGCTTATTGATCCATGTCTTGCTGGTGCCTATGACGAAGAGCAGATGAAATATATAATCTTAACAGCTTCTTTGTGTATAGCGGAGTCGACCGTTCGACCGCGAATGCATCAGGTATTGCAGATAGCAAAAGGTGAAGAAGGCAGCATGGAGTTAGTTAGGGAACTCCTGGAACCTTTATGTGATGATGAGTTCCTTGAAGAAGAGTTTCCTTCACCTGAGAGTTCCAATGACATATCTAAACATTTGCAGACTATTGGACAAGATTAA 1500 0.4387 MMWSAPRSALSAMALEPPPSPQPSSATSNDGLQSKQREQNEAKQRSIIRSLRRLTALSTGSLPDVEPPRSEDVSVSSMKSCPSPGSESSSSNTGSPSNSGEQSDLKGNNNNKMNGIVSILKKGSQMPLYTLTSIKEAPYFKKRTSAERIPEEFSAILKQGSSLNPEAYRFKASWKLFTLADLQAATNNFSQENLIGQGGYGEVYKGQLADGTFVAIKRLTRGDQEEMTADFLSELGIIVHVDHPNIAKLIGYGVEGGMHLVLQLSPHGSLASILYGPREKLNWNMRYKIALGTAEGLHYLHAQCQRRIIHRDIKAANILLSEDFEPQIADFGLSKWLPDKWTHHTVSKVEGTFGYLPPEYFMHGIVDEKTDVFAYGVLLLELITGRPALDKAQKSLVMWAKPLISKSKMDELIDPCLAGAYDEEQMKYIILTASLCIAESTVRPRMHQVLQIAKGEEGSMELVRELLEPLCDDEFLEEEFPSPESSNDISKHLQTIGQD 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02745 499 MobiDBLite consensus disorder prediction 478 499 - -
Aip01g02745 499 MobiDBLite consensus disorder prediction 1 112 - -
Aip01g02745 499 SUPERFAMILY Protein kinase-like (PK-like) 170 452 IPR011009 -
Aip01g02745 499 Pfam Protein kinase domain 190 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g02745 499 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-PROTEIN KINASE RBK2 ISOFORM X1 74 463 - -
Aip01g02745 499 ProSitePatterns Protein kinases ATP-binding region signature. 195 217 IPR017441 GO:0005524
Aip01g02745 499 Gene3D Transferase(Phosphotransferase) domain 1 266 465 - -
Aip01g02745 499 SMART serkin_6 189 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g02745 499 MobiDBLite consensus disorder prediction 73 112 - -
Aip01g02745 499 ProSiteProfiles Protein kinase domain profile. 189 463 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g02745 499 ProSitePatterns Serine/Threonine protein kinases active-site signature. 308 320 IPR008271 GO:0004672|GO:0006468
Aip01g02745 499 PANTHER OS08G0249100 PROTEIN 74 463 - -
Aip01g02745 499 Gene3D Phosphorylase Kinase; domain 1 154 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02745 Aip-Chr1 128843413 128846134 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02745 172 468 Receptor kinase-like Gene Family AT4G02010 41.424 5.82e-70 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Aip01g02745 Pkinase 4.3e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02745 - - lja:Lj6g3v1915960.1 536.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02745 01 128843413 128846134 Aip01g02745 01 128843413 128846134 ECH
Aip01g02745 01 128843413 128846134 Aip06g00988 06 14099150 14104645 ECH
Aip01g02745 01 128843413 128846134 Aip09g01780 09 46316632 46329931 ECH
Aip01g02745 01 128843413 128846134 Aip06g00262 06 3061699 3063751 ECH
Aip01g02745 01 128843413 128846134 Aip02g02858 02 104747761 104752240 ECH