Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02716 ATGTCACGGAAGCTACGATTCTTCAAGGATCAAATCAATAAAGCTGGCATAATGTCTTCTCATACTGCATTGCAACCAGAGATTGACTTGGAGGATTTAGAGATACAACTTGCTGAACATGAACATGAGCTAATTGAAATGAATTCCAATAGTGACAAACTTCGACAATCATATAATGAACTCCTCGAATTCAAGATTGTATTGCAAAAGGTTTCGTTGCGCCTTACTGACTTGGAGGCAACTTTGGATATGGGGTTGAGGCACCGCAAAAAGGCTCTAGCTTCTGTAGGGGAACATCTATCAGACTGGATGAACATGATCATAGAGTGTTGTGATACTCATTTTTCGGATGAAGAACTCACAGAAATAGTTGAGATTGTGAAGAGAACATTGCCACCACCCCTTAAAGATGTCAATGGTGCTGAAGCAACAAAATCAAATGGTGAGCAAGGTGGGGAACAAATGGAAACAAGTTGA 477 0.4025 MSRKLRFFKDQINKAGIMSSHTALQPEIDLEDLEIQLAEHEHELIEMNSNSDKLRQSYNELLEFKIVLQKVSLRLTDLEATLDMGLRHRKKALASVGEHLSDWMNMIIECCDTHFSDEELTEIVEIVKRTLPPPLKDVNGAEATKSNGEQGGEQMETS 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02716 158 PANTHER VACUOLAR PROTON ATPASES 70 107 IPR002490 GO:0033179|GO:0046961|GO:1902600
Aip01g02716 158 PANTHER VACUOLAR PROTON ATPASES 1 71 IPR002490 GO:0033179|GO:0046961|GO:1902600
Aip01g02716 158 Coils Coil 30 57 - -
Aip01g02716 158 MobiDBLite consensus disorder prediction 135 158 - -
Aip01g02716 158 PANTHER VACUOLAR PROTON ATPASE A1 70 107 - -
Aip01g02716 158 PANTHER VACUOLAR PROTON ATPASE A1 1 71 - -
Aip01g02716 158 MobiDBLite consensus disorder prediction 143 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02716 Aip-Chr1 128086619 128088190 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02716 1 72 Primary Pumps ATPases(2) AT2G28520 71.233 5.76e-27 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02716 K02154 - adu:107474914 146.747