Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02710 ATGATGCATGATCATAGAAAAAAGTCCTCTGTAGATGTAGATTTCTTTACAGAGTATGGTGAAGGGAGTAGATACAAAATAGAGGAAGTAATTGGCAAAGGAAGTTATGGTGTTGTTTGCTCTGCATATGATACACATACTGGAGAAAAGGTTGCAATAAAGAAGATAAATGATATATTTGAACATGTCTCTGATGCTACTCGCATTCTTCGGGAGATCAAGCTTCTTAGACTCTTACGCCATCCTGATATTGTGGAGATTAAGCATATTTTGTTACCTCCTTCTAGAAGGGAATTCAAGGATATATATGTTGTTTTTGAACTAATGGAATCTGATTTACATCAGGTCATCAAAGCAAATGATGATTTGACTCGAGAACATTACCAGTTTTTTCTTTATCAGCTTCTTCGAGGCTTGAAGTATATACACACAGCAAATGTTTTTCACCGAGATCTAAAGCCGAAAAACATTTTAGCAAATGCCGACTGCAAATTGAAGATTTGTGACTTTGGTCTTGCTAGAGTGGCTTTCAACGATACACCAACTGCTATATTCTGGACTGATTATGTTGCTACAAGGTGGTATAGAGCTCCTGAGTTGTGCGGATCCTTTTTCTCCAAGTATACACCAGCAATAGACATATGGAGCATTGGCTGCATTTTTGCAGAACTATTAACTGGAAAACCTCTTTTCCCTGGGAAGAATGTTGTCCATCAATTGGACCTCATGACTGATTTTCTCGGGACACCATCTCATGAAGCCATAGCTAGGGTAAGGAACGAGAAAGCTCGGAGATACTTGAGCAGCATGCGTAGGAAGAAACCAGTTCCTTTCTCCCAGAAGTTTCCTAATGCAGACCCCCTTGCCCTTCGTTTGTTAGAAAGAATGCTGGCATTTGAGCCTAAGGATCGACCTACTGCTGATGAGGCTCTAGCTGATCCATATTTCAAAGGCTTGGCCAAGGTTGAGAGAGAGCCTTCTGCTCAGCCAGTTACCAAGATGGAATTTGAATTTGAGAGACGCAGGATAACAAAGGAAGATGTACGAGAACTCATATACCGAGAGGCTTTGGAGTACCATCCAAAAATGTTAAAGGAACATCTAGAGGGAGCAGAGCCAACAGGTTTCATGTATCCGAGTGCTGTTGACCACTTCAAGAAGCAATTTGCATATCTCGAGGAGCATTACGGAAAAGGTGGAACTGTTACTCCACCTGAAAGGCAACATGCATCATTACCCAGGCCATGTGTACTATATTCAGATAAGTCGAAACCGAATGTATGTGAGGTTGCAGAAGATCTCTCCAAGTGTAGCATCAAAGAAAGTGAGAAGCCAGCCATAGATAGGAATGGTGTTATCCCGTTGACCAAGCCTCCTTTACATGCTCCTCAAAATATTCAAGGCATAGCTGCCCGGTCTGGGAGAGTTGCTGGTTCGGCGTTGAATTACAACAACTGTGGGGTAGCAGTGACAGCAGAGGCTGCTCAGCGGAGGATGGTTAGAAATCCACCTGTATCGACACAATATGCTGCTTCTAGCTGTTCATATCCTAGAAGAAACCCGAGCTGTAAAACCGAAAGACCAGAAGACAATGGTATTGAAGGTTCTAACGGACTTCAACCGAAGCCTCAATACATGGCACGAAAAGTTGCAGCCGCTCAAGGTGGAGCTGGTGGTCATTGGTAG 1686 0.4276 MMHDHRKKSSVDVDFFTEYGEGSRYKIEEVIGKGSYGVVCSAYDTHTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDLMTDFLGTPSHEAIARVRNEKARRYLSSMRRKKPVPFSQKFPNADPLALRLLERMLAFEPKDRPTADEALADPYFKGLAKVEREPSAQPVTKMEFEFERRRITKEDVRELIYREALEYHPKMLKEHLEGAEPTGFMYPSAVDHFKKQFAYLEEHYGKGGTVTPPERQHASLPRPCVLYSDKSKPNVCEVAEDLSKCSIKESEKPAIDRNGVIPLTKPPLHAPQNIQGIAARSGRVAGSALNYNNCGVAVTAEAAQRRMVRNPPVSTQYAASSCSYPRRNPSCKTERPEDNGIEGSNGLQPKPQYMARKVAAAQGGAGGHW 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02710 561 MobiDBLite consensus disorder prediction 508 543 - -
Aip01g02710 561 Gene3D Phosphorylase Kinase; domain 1 40 361 - -
Aip01g02710 561 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 478 - -
Aip01g02710 561 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g02710 561 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Aip01g02710 561 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Aip01g02710 561 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g02710 561 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g02710 561 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Aip01g02710 561 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 478 - -
Aip01g02710 561 SUPERFAMILY Protein kinase-like (PK-like) 22 320 IPR011009 -
Aip01g02710 561 CDD STKc_TDY_MAPK 24 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02710 Aip-Chr1 127952938 127957384 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02710 1 561 MAP Kinase Gene Family AT5G19010 78.883 0.0 920
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Aip01g02710 Pkinase 9.2e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02710 - K04371 gmx:100814013 1015.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02710 01 127952938 127957384 Aip01g02710 01 127952938 127957384 ECH
Aip01g02710 01 127952938 127957384 Aip04g00424 04 4978121 4983365 PCT