Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02691 ATGATTCAGGCCGGTCAAGTCAACGAAGTTCGCGATTTCTTTGACCCTTCCGGAGACTACTCCAGAGGGATTCGGAGGGCCATTGGAGTCCCTGAGTTTCACCAATTTCTTAAAGCCGAGTCCATGGAAGCAGACCAGGAAACCAAGAACAGGCTTCTAGAAGACGCCATTGCCACCATCAAGCTCAACAACTGCAAGCTCGCCAACCGCCAGCTACACAAGATTCAGCGCCTCCACGCCGTGTGGAAGAGAAGCATGCACCGCCTCGACGCCACTCAGGCTTTTCTTAACACACAAGAAGCCGCTTGGGAGGATCACGTCGTGGCTAAAGCTAGAAGGATCGTGCAGAGGTTCTTGTACGACGAAACTCATCAACATGTTGTTCCGCCGCTTGTGTCCTCTCCAGCTTCGCCGCCAGCAGCCGCCATGGCCGCGGTAACACATTAG 447 0.5414 MIQAGQVNEVRDFFDPSGDYSRGIRRAIGVPEFHQFLKAESMEADQETKNRLLEDAIATIKLNNCKLANRQLHKIQRLHAVWKRSMHRLDATQAFLNTQEAAWEDHVVAKARRIVQRFLYDETHQHVVPPLVSSPASPPAAAMAAVTH 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02691 148 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 5, CHLOROPLASTIC 1 126 - -
Aip01g02691 148 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 1 86 - -
Aip01g02691 148 Gene3D - 87 119 IPR027417 -
Aip01g02691 148 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 1 126 IPR039657 -
Aip01g02691 148 Pfam IPP transferase 1 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02691 Aip-Chr1 127644339 127644785 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02691 1 123 C2H2 Transcription Factor Family AT2G27760 34.899 8.14e-19 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02691 K10760 - gmx:547754 157.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02691 01 127644339 127644785 Aip01g02691 01 127644339 127644785 ECH
Aip01g02691 01 127644339 127644785 Aip04g00434 04 5100572 5103058 PCT