Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02690 ATGAGCTGTGTTGGTAGCGCAATTGGTAGCAGAGTTTTAATAAATAAATGTTTGGTCAACTTGGCAGGTTCGGTTAGTTTTAAAGAAGAAACAAGAAAGGATATGATGATGATGATGATGAGTGTTAATAACTCGGTGTCATGTGGATGCAAGCCCCTACTCATGACCATGGAGTCCCTCTTCCACCACCGCATCACCACGAAGGAGAAGGTTGTGGTGGTCATTGGCGCCACCGGCACCGGCAAGTCCAAGCTAGCCATTGACATAGCCACTCACTTCAAACCGGCGGAGATTGTCAACTCCGACAAAATTCAAGTGTTCAAAGGCCTCGACATCACCACTAACAAGGTGACAGAGGAAGAGTCTCGTGGGGTCCCACACCACCTTCTTGGTTTCGTGGACGATGACGACTTCACAGCCACACAATTCTCTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCTTCATTGACCACTTGGTCAACCACCATGACCACTTTCGTTTAA 570 0.4 MSCVGSAIGSRVLINKCLVNLAGSVSFKEETRKDMMMMMMSVNNSVSCGCKPLLMTMESLFHHRITTKEKVVVVIGATGTGKSKLAIDIATHFKPAEIVNSDKIQVFKGLDITTNKVTEEESRGVPHHLLGFVDDDDFTATQFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSLTTWSTTMTTFV 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02690 189 Gene3D - 67 151 IPR027417 -
Aip01g02690 189 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 52 144 - -
Aip01g02690 189 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 72 143 IPR027417 -
Aip01g02690 189 Pfam IPP transferase 105 145 - -
Aip01g02690 189 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 52 144 IPR039657 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02690 Aip-Chr1 127643692 127644261 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02690 74 143 C2H2 Transcription Factor Family AT2G27760 59.155 1.40e-22 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02690 K10760 - gmx:100812928 131.724