Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02664 ATGAAAATGAAGTCCCTCTTATATCCGACCCTGTTGTCATTGCTGCTTTGGCACGTGGCGGTGGTATCAGCTGCAAGGCTGAACATGGCTAGCGATGAATCGGCCTTGGTTGCCATGAGGGAGCATTTTAACTCCTTGGATCCCAACAATGTGCTCGCAAGCAACTGGTCCAGCAGTACCTCTGTTTGCAACTGGATTGGCCTCACCTGCGGCTCTTCCCACCGCAGAGTAACTGCCTTGAATCTCTCATACATGTCTCTTGATGCCACCATCCCTCCGCATCTTGGAAACCTGTCATTCCTTTCTCGCCTGCATCTTCCCAACAATAGCTTCCATGGTCTGAGCATCATCAACCTTAGATTCAACAAATTCACTGGAAGTATCCCCTCCTGGTTTGAATCTCTACGGAAACTAAAACACCTGTTACTGGCAGGCAATAGTTTCACTGGCACAGTCCCACACTTCCTGTTCAACATGAGTTCCCTGCAATCGCTTGAACTTCTTGAAAACAAGTTTTGGGGTCCCTTACCTTCCAACATTTTCTTGTCTCCTTCTTTGCAATATCTGTATCTTACTTACAACCAAATTTCAGGAGCTATCCCTTCAGCTATCATCAACAGTTCGTTACTGCAGGTTATTGACCTCGACTACAACAACCTATCCGGACAACTGCCGGAGCGCATCTTCCACCATCTTCCAAACTTGAAAGAGCTTCACGTGACTAGTAATACCTTATCCGGTGAACTTCCACGCAGTTTGTTCAATTGCAAGCAACTGCAATATTTATCCTTATCCTACAACACCTTCGGTGGAAACATACCATCTTCCATCGGGAATTTAACAAGCCTCAATGAGATCTATCTTGGCTATAACAATTTCAGAGGTGCGATACCAAATGAAATTGGTAATCTACGTAGTTTAGAGATTCTGAGTCTTCCTTTCGCCAATGTAAGTGGCTACATTCCGCCATCAATCTTTAATATTTCTACCCTACGGGTAATTACTGTTAGTAGAAATCATTTATCAGGCAGCCTCCCAGCAAGCCTAGGCTACATGCTTCCAAAACTTGTTGAGCTGTACATGGGGATTAATTATCTCAGTGGAAGAATCCCAAGCTCCTTGTGCAATGCCACTATGCTTAATAACATAGATTTGGCTTACAATTCATTTTCTGGATACATTCCAGACATTTTTGGCAGCTTAAGAAGTCTCCAGCTGCTCAATCTTGGAAAAAATAATTTGACAAGTGATTCAGAGCTAAGCATTATAAATTCTTTGACAAATTGTAGATTTCTCAAAAAGTTGATATTTTCTGGAAATCCATTGGATTCTATTCTTCCAATATCGGTAGGAAACCTTTCTACTTCTCTGGTTGACTTGAAACTTCGGGGTTGTTCAATGAGAGGCACCATTCCAGCAAGTATTGGCAACTTGAGCAGCTTGATAAACCTTGACCTTGGTACTAATAATTTTGTTGGAACCTTTCCTACTAGCATAGGGAAATTAATAAAGCTACAAGGCTTCTATTTACATGACAACCAATTGGAAGGATTTGTTCCGAATCAATTGTGTCAACTAACGAGCTTGTATCAATTTTCCCTTAAAAGAAACAAATTCTCTGGCCCTATACCTTCTTGCATAAGCAATCTTACCTCATTGAGATGGCTTTGGCTTGCTTCAAATAAATTCAACTCAATACCTTCCACCGTGTGGAAGCTGTTCGATTTATTGCTTTTAGACTTATCTTCCAATAATTTAAGTGGATATCTCCCATTAGATAGTGGAAATCTAAAAGCCATAAGTTGGATTTATTTATCAGGAAATCAATTTTCAGGTAGCATCCCAAGAAGCCTCAGCAATCTTATGAATTTGGTTCATCTTACCTTAGCAAGAAACAAATTTGAAGGGCCCATCCCAGAATCATTTGGTCGTATGGTAAGTTTGGAACAACTTGACTTATCAGAAAATAACTTGTCTGGTGTCATTCCGAAAACATTGGAGGCACTTGTGTATCTGAAATATTTCAATGTTTCTCACAATAAGTTAAAAGGAAAAATCCCGGATGGGGGACCTTTTGCAAACTTCTCAGCTCAGTCGTTCATGGGGAATAAAGGATTATGTGGTGCTCCACGTTTCCATTTTTCGGAGTGTAAAATTGAAAAATCCCGAAAATGGAATGCACATATTGTGTTGACATATATTTTACCTGCAGCAATAGTTGCCACCCTTCTTGTGGCATTCCTTTGCATCCTAAAATTCCGGAAGCACAAGGTGGTCAACAATTCAGAGGTGGATCAATCGGGAGCAAGATGGAGAAGAATATCATACTATGAAATTCGGCAAGCATCAGATAGGTTCCATGATGGCAACTTGCTTGGTGTAGGGAGTTTTGGAAGAGTGTATAAAGGAGTACTCTCAGATGGGACGAATGTTGCAGTGAAAGTGTTTAATCTGGGGCTGGAAGGAGCATTTAGGAGTTTTGATGCTGAATGTGAGATATTGCGCAGTGTCCGCCATCGAAACTTAACCAAAATCATTAGCAGCTGCAGCAACATGGACTTCAAGGCATTGATCCTAAGCTACATGCCTAATGGGAGTTTAGAGAGGTGGCTACACTCGGAACACCATGGCTTGAGTATGATCCAGAGGCTAAACATAATGATAGATGTTGCAGAAGCAATGGATTACCTGCATAATGGTGGTTCTGTACCAATTATACACTGTGATTTGAAACCCAGCAACATATTACTAGATGAAGACATGGTTGCCCACGTGACTGATTTTGGCATTGCAAAATTGCTGAGTGGGGATGACTCCATCATGAATCTCATGAATCTAGCCACAATAGGCTATATGGCCCCTGAATATGGACTTGAGGGAAGAGTGTCTAGGCAAGGTGATGTGTATAGCTATGGAATTTTACTTATGGAGACCTTCACACAGAAAAAACCCACTGATGAAATGTTTGTGGGAGAGTTTAGCATCAAAGAGTGGGTGAAAATGTCGTGCCCTAATTCACTACTTGATATCGTTGATGCAAAATTATTGGTGGAAGAAGGAGAAACAGATACTAAACAGGACTGCTTGTTGTCTATAATGACTTTAGCTCTGAATTGCTCAGCTGAGTCTCCGGGTGAAAGGACAAGAATGAAAGACGCTATGAATGCTCTTAAAAAGATTAAAAGATTACTCTTGAACTAA 3201 0.4111 MKMKSLLYPTLLSLLLWHVAVVSAARLNMASDESALVAMREHFNSLDPNNVLASNWSSSTSVCNWIGLTCGSSHRRVTALNLSYMSLDATIPPHLGNLSFLSRLHLPNNSFHGLSIINLRFNKFTGSIPSWFESLRKLKHLLLAGNSFTGTVPHFLFNMSSLQSLELLENKFWGPLPSNIFLSPSLQYLYLTYNQISGAIPSAIINSSLLQVIDLDYNNLSGQLPERIFHHLPNLKELHVTSNTLSGELPRSLFNCKQLQYLSLSYNTFGGNIPSSIGNLTSLNEIYLGYNNFRGAIPNEIGNLRSLEILSLPFANVSGYIPPSIFNISTLRVITVSRNHLSGSLPASLGYMLPKLVELYMGINYLSGRIPSSLCNATMLNNIDLAYNSFSGYIPDIFGSLRSLQLLNLGKNNLTSDSELSIINSLTNCRFLKKLIFSGNPLDSILPISVGNLSTSLVDLKLRGCSMRGTIPASIGNLSSLINLDLGTNNFVGTFPTSIGKLIKLQGFYLHDNQLEGFVPNQLCQLTSLYQFSLKRNKFSGPIPSCISNLTSLRWLWLASNKFNSIPSTVWKLFDLLLLDLSSNNLSGYLPLDSGNLKAISWIYLSGNQFSGSIPRSLSNLMNLVHLTLARNKFEGPIPESFGRMVSLEQLDLSENNLSGVIPKTLEALVYLKYFNVSHNKLKGKIPDGGPFANFSAQSFMGNKGLCGAPRFHFSECKIEKSRKWNAHIVLTYILPAAIVATLLVAFLCILKFRKHKVVNNSEVDQSGARWRRISYYEIRQASDRFHDGNLLGVGSFGRVYKGVLSDGTNVAVKVFNLGLEGAFRSFDAECEILRSVRHRNLTKIISSCSNMDFKALILSYMPNGSLERWLHSEHHGLSMIQRLNIMIDVAEAMDYLHNGGSVPIIHCDLKPSNILLDEDMVAHVTDFGIAKLLSGDDSIMNLMNLATIGYMAPEYGLEGRVSRQGDVYSYGILLMETFTQKKPTDEMFVGEFSIKEWVKMSCPNSLLDIVDAKLLVEEGETDTKQDCLLSIMTLALNCSAESPGERTRMKDAMNALKKIKRLLLN 1066
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02664 1066 Gene3D Ribonuclease Inhibitor 242 358 IPR032675 -
Aip01g02664 1066 Gene3D Ribonuclease Inhibitor 116 241 IPR032675 -
Aip01g02664 1066 Gene3D Ribonuclease Inhibitor 31 115 IPR032675 -
Aip01g02664 1066 Gene3D Ribonuclease Inhibitor 359 418 IPR032675 -
Aip01g02664 1066 SUPERFAMILY RNI-like 335 686 - -
Aip01g02664 1066 Gene3D Ribonuclease Inhibitor 419 719 IPR032675 -
Aip01g02664 1066 SUPERFAMILY RNI-like 80 376 - -
Aip01g02664 1066 Pfam Protein kinase domain 786 988 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g02664 1066 Gene3D Transferase(Phosphotransferase) domain 1 862 1064 - -
Aip01g02664 1066 ProSiteProfiles Protein kinase domain profile. 786 1064 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g02664 1066 SUPERFAMILY Protein kinase-like (PK-like) 762 1057 IPR011009 -
Aip01g02664 1066 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 136 274 - -
Aip01g02664 1066 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 6 137 - -
Aip01g02664 1066 SMART serkin_6 786 1064 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g02664 1066 Pfam Leucine rich repeat 113 171 IPR001611 GO:0005515
Aip01g02664 1066 Pfam Leucine rich repeat 623 682 IPR001611 GO:0005515
Aip01g02664 1066 Pfam Leucine rich repeat 210 267 IPR001611 GO:0005515
Aip01g02664 1066 Pfam Leucine rich repeat N-terminal domain 30 70 IPR013210 -
Aip01g02664 1066 SMART LRR_typ_2 232 256 IPR003591 -
Aip01g02664 1066 SMART LRR_typ_2 502 526 IPR003591 -
Aip01g02664 1066 SMART LRR_typ_2 280 304 IPR003591 -
Aip01g02664 1066 SMART LRR_typ_2 401 424 IPR003591 -
Aip01g02664 1066 SMART LRR_typ_2 550 573 IPR003591 -
Aip01g02664 1066 SMART LRR_typ_2 184 207 IPR003591 -
Aip01g02664 1066 SMART LRR_typ_2 645 668 IPR003591 -
Aip01g02664 1066 SMART LRR_typ_2 353 377 IPR003591 -
Aip01g02664 1066 SMART LRR_typ_2 208 231 IPR003591 -
Aip01g02664 1066 SMART LRR_typ_2 135 159 IPR003591 -
Aip01g02664 1066 ProSitePatterns Serine/Threonine protein kinases active-site signature. 905 917 IPR008271 GO:0004672|GO:0006468
Aip01g02664 1066 Gene3D Phosphorylase Kinase; domain 1 756 861 - -
Aip01g02664 1066 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 136 274 - -
Aip01g02664 1066 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 6 137 - -
Aip01g02664 1066 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 256 1061 - -
Aip01g02664 1066 ProSitePatterns Protein kinases ATP-binding region signature. 792 814 IPR017441 GO:0005524
Aip01g02664 1066 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 256 1061 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02664 Aip-Chr1 127356148 127359564 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02664 31 614 Receptor kinase-like Gene Family AT3G47570 30.968 1.26e-65 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Aip01g02664 Pkinase 2.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02664 - K13420 aip:107613554 1928.29