Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02659 ATGATATCATCCTTAAAGTACACAGCACCCTCACCCCTCGCCGGCTCTGCTGCATTCTCCTGCAGAAAGCGTGTTCCTGTTCCAAGGCTACCACCCTCTATTCAAAATCTTCAACAAAGCACTGCACTACCCTCTTTCTCTTCCCATAAACCACTTTACATTATTCCATGCACTCAGAACCTCACATTGTCAACTAAACCTAGAAGGAAGGTTGCAGAGTGTCATGCCTATGAGGCAGATAAGTCACAACCACAAGCAGCAGGGACATCAGAGGCGGCTCAGAAGCTCAAGATTGGTTTGTATTTTGCTACATGGTGGGCACTGAACGTTGTCTTCAACATATACAACAAGAAGGTTCTCAATGCTTTTCCTTACCCTTGGCTCACTTCCACTCTGTCCCTCGCCGCAGGCTCTCTTATCATGTTCATCTCCTGGGCCACAAGGCTCGCTCATGTCCCTAAAGTTAACATGGATTTCTGGAAGGCCTTGTTCCCGGTTGCAGTAGCACACACCATTGGGCATGTTGCAGCTACTGTGAGTATGTCCAAAGTTGCAGTGTCATTTACTCACATCATCAAGAGTGGAGAACCGGCTTTCAGCGTCCTAGTATCGAGGTTCTTGCTCGGCAAATCGTTCCCTATACCGGTTTACTTATCACTGGTGCCAATTATTGGAGGTTGTGCTCTTGCTGCTGTGACCGAACTCAATTATAATATGATCGGGTTTGTGGGGGCTATGATATCAAACTTGGCATTTGTGTTTAGGAACATATTCTCAAAGAAGGGAATGAAGGGCATGTCTGTTAGTGGATTGAACTATTGTGCTTGCCTTTCCATATTGTCTCTATTGATTCTCATACCTTTTGCCATTCTTGTGGAGGGTCCTAAGATGTGGGCTGTTGGCTGGCAAACTGCCCTCTCTCAGATTGGTCCAAATTTTGTTTGGACATTTCGGCTTTGCTGCTGCGATTGCAATTCTTGGCACCTTCCTTTATTCACAGGCAAAACAGTGAGGCCTAATTCAGAAGCTAAGTTAAGTGAATGCTTATTCAGGGATGGAGCTAGAACTATGAGCCTGCTGAGAAGAATTTACTTTGATTCAATAAGGACTAAGAACGAACTCTGGAATTCTCACCCAATGACAGCATTTGAGGATAGTTCAACATTGTGCAAATGTCTTAATTACAAAAAACTAAGCTTTCAAGTTTGGAAAGATCTTGTAAAGAACCCAAGAATACCTCCAAGGATTGCAATGCAAGCTCTTATTTCCCAAAAAGCAAAAATCCCATCAAGTCTTTTTGCAATTAATGGAAGTCGCATAATGCAAGAATAA 1332 0.4369 MISSLKYTAPSPLAGSAAFSCRKRVPVPRLPPSIQNLQQSTALPSFSSHKPLYIIPCTQNLTLSTKPRRKVAECHAYEADKSQPQAAGTSEAAQKLKIGLYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLAAGSLIMFISWATRLAHVPKVNMDFWKALFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGKSFPIPVYLSLVPIIGGCALAAVTELNYNMIGFVGAMISNLAFVFRNIFSKKGMKGMSVSGLNYCACLSILSLLILIPFAILVEGPKMWAVGWQTALSQIGPNFVWTFRLCCCDCNSWHLPLFTGKTVRPNSEAKLSECLFRDGARTMSLLRRIYFDSIRTKNELWNSHPMTAFEDSSTLCKCLNYKKLSFQVWKDLVKNPRIPPRIAMQALISQKAKIPSSLFAINGSRIMQE 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02659 443 SUPERFAMILY Multidrug resistance efflux transporter EmrE 138 232 - -
Aip01g02659 443 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Aip01g02659 443 PANTHER SOLUTE CARRIER FAMILY 35 38 316 - -
Aip01g02659 443 PANTHER GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC 38 316 - -
Aip01g02659 443 Pfam Triose-phosphate Transporter family 96 305 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02659 Aip-Chr1 127275100 127277580 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02659 54 315 Antiporters AT5G54800 74.632 3.45e-144 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02659 K15283 K05350 gmx:100790658 444.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02659 01 127275100 127277580 Aip04g00471 04 5543547 5545908 PCT