Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02656 atgagccataatccttccacagaTCAGCCACCTCCAACTCCAACCACCTCATGTGCCCCTGACTCCCTCTTCCACCACCACCTACGCTGCCCCTCCTCTCCTTGCCCTATTTTCCTCCCTCTCTACCTCTGTCATTTTCTTCTTCCTTCGTCCTTTTTCCCTTCCATTCTTCTTCCTCGGCCCCTGCTTCCATCACCGCCGCACAGCCGCGCTTCCGTCAGCCACCATCAACGCCGGCGACCTCCTCCTTCCTCTCGCACTAGCACCGCTTCCAGCAATAACCCATCCGGTGAGGCGGATCCAAATTCTTGCGGCGGAGACACTGTCACCGGCCAGAATCGCAAGTTCTGTCCGCCGCCACTTACGCCGCGATTGCAACAGAGTTCCAAGTCCCGGTCGAGCCTGCCGCCCCTCCAGCCGCTTTTGATAGCCCGGCGGAGCCTCGATGAGTGGCCGCAAGCGAGATCAGATGACATTGGGGAGTGGTTGCCCCCACAGCCGCCGTTGACCCTCGGTGGCGGCATGAGAGGTAATCCTGGTGAAAGATTGAATCTTGATCTCTCCTCAATTCAGATGAACAATAATAGGAATTGCAATAATGGCAGTAATAGTAGTGGTAATAATAATAGTTGTAACAATAATGGTGTTAGTAGACTCTTGAAGAGGGATAGAATTGTATTTTTTGATAAGGAGTGTTCAAAGGTTGCTGAACATGTTTACCTTGGTGGTGATGCTGTTGCTAAGAATAGGGATATATTGAAACAGAATGGGATCACTCATATCTTGAACTGTGTTGGTTTTGTGTGCTCCGAATATTTTAAGGCTGATTTTGTGTATAGAACATTGTGGCTTCAGGATAGTCCTTCAGAGGATATTACTAGTATCTTATATGATGTGTTTGATTACTTTGAGGATGTTAGGAAACAAGGTGGTAGGGTGTTTGTGCACTGTTGTCAAGGTGTGTCTAGGTCTACTTCGTTGGTGATTGCATACCTCATGTGGAGGGAAGAACAGAGCTTTGATGATGCTTTTCAGTTGGTGAAGGCTGTAAGGGGTATTGTCGATCTAAATATGGGGTTTGTTTGCCAGTTGTTGCAGTGCCAGAAGAGGGTGCATGCAGTTCCTCTTAGTCCTACCTCTTTGCTTAGGATGTATAGGATGACTCCACACTCGCCTTATGATCCTTTGCATCTCATCCCCAAAATGTTAACGGATCCTTCGTCTTCCGTATTGGACTCCAGGGGAGCTTTTTTTGTACATATTCCCACTGCAATATTTGTTTGGTGA 1287 0.4732 MSHNPSTDQPPPTPTTSCAPDSLFHHHLRCPSSPCPIFLPLYLCHFLLPSSFFPSILLPRPLLPSPPHSRASVSHHQRRRPPPSSRTSTASSNNPSGEADPNSCGGDTVTGQNRKFCPPPLTPRLQQSSKSRSSLPPLQPLLIARRSLDEWPQARSDDIGEWLPPQPPLTLGGGMRGNPGERLNLDLSSIQMNNNRNCNNGSNSSGNNNSCNNNGVSRLLKRDRIVFFDKECSKVAEHVYLGGDAVAKNRDILKQNGITHILNCVGFVCSEYFKADFVYRTLWLQDSPSEDITSILYDVFDYFEDVRKQGGRVFVHCCQGVSRSTSLVIAYLMWREEQSFDDAFQLVKAVRGIVDLNMGFVCQLLQCQKRVHAVPLSPTSLLRMYRMTPHSPYDPLHLIPKMLTDPSSSVLDSRGAFFVHIPTAIFVW 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02656 428 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 290 351 IPR000387 GO:0016311|GO:0016791
Aip01g02656 428 ProSitePatterns Tyrosine specific protein phosphatases active site. 315 325 IPR016130 GO:0016311|GO:0016791
Aip01g02656 428 PANTHER MKPA PROTEIN 84 428 - -
Aip01g02656 428 Gene3D Protein tyrosine phosphatase superfamily 200 373 IPR029021 -
Aip01g02656 428 SMART dsp_5 231 370 IPR020422 GO:0006470|GO:0008138
Aip01g02656 428 ProSiteProfiles Dual specificity protein phosphatase domain profile. 231 373 IPR020422 GO:0006470|GO:0008138
Aip01g02656 428 PANTHER PROTEIN-TYROSINE-PHOSPHATASE MKP1 84 428 - -
Aip01g02656 428 CDD DSP 232 366 - -
Aip01g02656 428 Pfam Dual specificity phosphatase, catalytic domain 239 369 IPR000340 GO:0008138|GO:0016311
Aip01g02656 428 MobiDBLite consensus disorder prediction 122 136 - -
Aip01g02656 428 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 222 372 IPR029021 -
Aip01g02656 428 MobiDBLite consensus disorder prediction 66 137 - -
Aip01g02656 428 MobiDBLite consensus disorder prediction 83 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02656 Aip-Chr1 127260249 127261535 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02656 83 267 Protein tyrosine phosphatase (PTP) family AT3G55270 49.730 2.32e-43 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02656 - - aip:107613560 773.081