Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02645 ATGAACGGCTACCACCAGAATCCTCCTCCTCCAAACGGCTACCACCAGAATTTACCCGCCCTCACTCACGATTTTAAATTCAAAACTCAAAAAGCAATAAAAGATCGAACCCAACGGAACCTTCTTTCATTCTCACATTTTCCAGTTTCCGACAATGGATGGCGACGAAGCTCCTTTTCCATCTCCGTTCCCTCGCCAATCTTCATCCTCACTGCTGAACGACATCACCAACTTCAGAACCCCCAAACGCCCCTCCGTCAACCCTACCGTCGAAACTCCAAACACCAAATTCTTCACTGCCTCCAAATTAACCCCTCGGATTTGAAGCAGCGAATGAGGGTTTATCTGAGCCTTGGGAGTTGTAAGGAGATTTTTGAAGTCATGAGTCTAGTCACAAAGACAATTGATGGCGGAAGGCTGAACATGAAGGCACATTGCCCTATAGTAACGGATGTTGGGTTGAAAAATAAGGCCATAGGAATCCTTATGTGTTATAATCCAATTTGGCTGCGAATTGGACTGTATATAATTTTCGGTGGTGATTCCTTGCTGTCAAGTGAAGATGTTGATTCTGATCAAGATGTCAAGTATCTGAAAATGCTCATTGACAAGCTATTCTTTTCACATGAGGGTCTAGCTAAAGCATTCTCTTATAACAAAATGGTTGAAGGCGTGTATAGGGCAGGGTACTATGAGAATTTGGGGAATGTCATTTTGAAGCGGATACTACTCCTTGTGCTTGTCTTGGATAAAGCTAAATGTCAAAGTTGCCTCCCGCTTGAGTATGGCATTGACGGATTAGATGGGGGTTCCCCTTTATTATTCAGAGCAGAGTCTTGGATTAGATCGAGTAGTCAACTGATTCATGAATTTCTATCATCTGATGTAATGCATGGAGAAGGAAACCTTTTAGCACACTTGTTGATTTTAGGTTACAAAGCATCTCATCAACAGGGTCATCTTGTTGGATATGATTTCAGTGTTAGAGATTTATTCGTTGATCTCCAAGATGGAGTGAAACTGTGTCGGGCTATTCAGCTCTTGCAACATAATCCCTCTATCCTGACGAAAATTGTAGTTCCCTCAGATACTCGTAAGAAAAATTTAGCAAACTGTGTTCTTGCCCTTCAATATCTTAAACAAGCTAGTGTGTCCCTACATGATGAAGATGGCATGATGATTTTAGCCGATGACATTGTTAGTGGTGATAAAGAACTTACACTTTCCTTGCTCTGGAATATGTTTGTTCACTTGCAGCTACCGCTTTTGGTTGACAAAACAAGTTTGGTGGGGGAAATTTCCAAAATTCGAGGAATCGGCATGGATCTCATAAACAGTGCAAATTCGACTTCTCTGGAGATGCTATTGAATTGGATTCAGGCCGTTTGTGAAAATTATGGTTGTGGAATTGACAGTTTTCATTCCCTTGTTGATGGCAAAGCTATCTGGTGCTTACTTGATTATTACTTCCAGAAGGAATTCCATAATTCCTGCTCATTGAAGGAAGTTAATATGAAAAGTAACAAGGCATCAGTAATGTCAGTTGATGAATACTCAGATGCATTGTACAATTTTATATTATCCCAGAAGTTGACTACAATACTTGGGAATTTTCCAGAGGTACTTCAGATAAGTGAGCTACTTCAATATAATGGTGCTCGCAGTGATCGAAGTGTGGTGATATTGTTGGTCTTCCTAGCAAGCCAATTATTTGTCAAGAAAAATGTGGATCAATTAAATTTCCATAAGCTCCTAGGCTATGATTGCCAAAGTGCAAACCGCAGACATTTGAGGATGGTGCAGTGCCTTTCAAGTTCTGAATCAGTACAAAATCCAGATGATTCATATGTACAAGGCAATGAAGATGCTGCAAGAAAATTCAAGGCCATCCAGGCTTGGTGGCAGGATATGGCTCAAAGAAACTCTATCAGGAAACCAGATTTTTCTAATTTGCAGAGATCCAGGACCATTGAATCTGGCACTGATACTAAAAGGGAATATGCTGCAAAAGTAATACAATCACGTTTCCGGGGATTTATCACTCGTAGTAAGTTTCACACGATGATAAATGCTGTCACCTTTTTGCAATCGGTTTTCAGAGCATGGATGAGGGCAAGGCAGGAGTTGGTCTGTGTGGCATACACCACCAGTCAAGCCTGTGACTTTTCATGTGACGTATTGAGGCATTCTCAAACGTATAGGAGATATGCCATGCTTTTTGTTCATAGGCATTCTTTAGTGAAGCTGAAGAGATCTGCAAAGCTAATACAGCAAGCTGTGAGGAGTTGGCTCTATTGCAGGCATCAGCAAGGATGCAGTAGATGTCCTTCTGTCAGGACACTAGATCCTGTGACTGCTGCCATTACTATTCAGAAATTTGTCCGTGGTTGGATGGCACGATATAGATATATTTTTGAGCTTGATCTAAAAGAGAAAGCTATGAATTTAGCCCAACAGAACATTACACTTGATCTTCATACAAATGCAGCTGTTACTATTCAGCTTGCTTGGAAGAATTACAGATGCTGCAAGTCAACCTGCCAGAAGCAGCATCTTCTTGCAACTAAAATTCAAAGTAATTTCCGTAGGTGGTTTTTAAGAAAAAGATTTTTAAATCATGTTAAAGCTACCATAAAAGTTCAATCTTATTTCCGAATGTGGAGATGTGTGAAGGCTTTACAGCACTTAAAAGTCACATCAAGAGCAGCTACTTTCATTCAGGCATTCTTGCGTGGATGGATTGCACGGAAAGAAGCTTGTGCACGCAAGAATCACATTGTTGACATTCAAAGGCATTGCCGTTGTTGGCTGATGAAACGGGACTTCTTGCTCAAAAGAGATGCTGCAGTGAAGATCCAGTGTATTATACGAAGCAGGGCATGCCAAAAGGTTCTCAATTGTCAAAAAGATGCTGCGTTGGAGATCCAGCGTTTTATCAGGGGGGATTCAGCTCGAAATCGGCTATTAGGTGGTGCTTCTACATTACGTGCTCTCATTCCTATTAGTTGCATTTCAAGACCGGTTGGAGTTTGTAGTTTTCAACTTGAACTACTGTTGTCTTCAGTTGTGAAATTGCAGCGGTGGTGGAAGCGTCTCTTGTTCCATAAATTGGCAAATAAGTCTGCCATGATTATCCAGTCCTGTGCTCGTGGGTGGATGGCCAGGAGAAAAGCCAATATTTACAGACACCAAATTGTTGTTGTCCAAGAAGATGCTGCAGTGGAGATCCAGAGATTTGTTAGGGGGCATATAACTAGAAATCGGCTGTTAGGGTGTGCTTCCAGTCTACGTGCAGCTATTCCTGTTGATTCCATTTCAAGTCCAGTTGGCTGTTGCAGTATTCAACTTAAACTGTTCTTGTTTTCTGTTGTGAAATTGCAACGATGGTGGAAAAGGTTCTTGACACAAAAAAATATGACCAACTCTGCCATTACCATTCAATCTTGCATTCGTGGATGGATAGCCAGGCAAAAGGCCGTTCTTCATAGACACCAAATTGTTGTCATCCAATCCCACTGGAAAGGTTACCTTGCACGTAGAGAGTCAAAGCAACTACTTGATTTGCGGTTGAGAATGAGAGAGTCTGCCAGAAATGTAGATGATAGCAAGCGTCTCATAAATAGACTATTGGCAGCGCTTTCAGAGCTACTTAACATGAAAAGTCTTAGTGATGTCCTGCATACTTGTTCTACATTAGATATGGCTACAGAACATTCTCAGAAATGCTGTGAAGAACTTGTGGCTGCAGGTGCAATTGACACCTTGTTGGGGCTTATCCGATCAGTCAGCAGGAGTATACCTGATCAGGAGGTTCTAAAACATGCTCTCTCAACTCTACGAAATCTTGGGCGCTACCCTCATCTACTGGAAGTGCTGATCCAAACACACAACTCTATACAAATAATTGTCATGGAGTTACTAAGGAATAAGGAGGAGGGATACTTCATTGCCTCTGAACTTATGAAGAAGATTTGTTCAACTCATTCTGGGGTTCAAGCCGTATTGAAGTCCCCAGCCCTCCTTAAACGACTGCACAACCTCGTTGATGAGCTTAAAAGAAAGGCAGTTTACGAGAAAAGAAATGGTAGAAGTGCTAGTGCAGTTATGAAAGATAACAGAGAGAGGAGATTGAAGGAAGCTGCTGAGATTCTGAAACTGATAGCACGAGCCTAA 4173 0.4155 MNGYHQNPPPPNGYHQNLPALTHDFKFKTQKAIKDRTQRNLLSFSHFPVSDNGWRRSSFSISVPSPIFILTAERHHQLQNPQTPLRQPYRRNSKHQILHCLQINPSDLKQRMRVYLSLGSCKEIFEVMSLVTKTIDGGRLNMKAHCPIVTDVGLKNKAIGILMCYNPIWLRIGLYIIFGGDSLLSSEDVDSDQDVKYLKMLIDKLFFSHEGLAKAFSYNKMVEGVYRAGYYENLGNVILKRILLLVLVLDKAKCQSCLPLEYGIDGLDGGSPLLFRAESWIRSSSQLIHEFLSSDVMHGEGNLLAHLLILGYKASHQQGHLVGYDFSVRDLFVDLQDGVKLCRAIQLLQHNPSILTKIVVPSDTRKKNLANCVLALQYLKQASVSLHDEDGMMILADDIVSGDKELTLSLLWNMFVHLQLPLLVDKTSLVGEISKIRGIGMDLINSANSTSLEMLLNWIQAVCENYGCGIDSFHSLVDGKAIWCLLDYYFQKEFHNSCSLKEVNMKSNKASVMSVDEYSDALYNFILSQKLTTILGNFPEVLQISELLQYNGARSDRSVVILLVFLASQLFVKKNVDQLNFHKLLGYDCQSANRRHLRMVQCLSSSESVQNPDDSYVQGNEDAARKFKAIQAWWQDMAQRNSIRKPDFSNLQRSRTIESGTDTKREYAAKVIQSRFRGFITRSKFHTMINAVTFLQSVFRAWMRARQELVCVAYTTSQACDFSCDVLRHSQTYRRYAMLFVHRHSLVKLKRSAKLIQQAVRSWLYCRHQQGCSRCPSVRTLDPVTAAITIQKFVRGWMARYRYIFELDLKEKAMNLAQQNITLDLHTNAAVTIQLAWKNYRCCKSTCQKQHLLATKIQSNFRRWFLRKRFLNHVKATIKVQSYFRMWRCVKALQHLKVTSRAATFIQAFLRGWIARKEACARKNHIVDIQRHCRCWLMKRDFLLKRDAAVKIQCIIRSRACQKVLNCQKDAALEIQRFIRGDSARNRLLGGASTLRALIPISCISRPVGVCSFQLELLLSSVVKLQRWWKRLLFHKLANKSAMIIQSCARGWMARRKANIYRHQIVVVQEDAAVEIQRFVRGHITRNRLLGCASSLRAAIPVDSISSPVGCCSIQLKLFLFSVVKLQRWWKRFLTQKNMTNSAITIQSCIRGWIARQKAVLHRHQIVVIQSHWKGYLARRESKQLLDLRLRMRESARNVDDSKRLINRLLAALSELLNMKSLSDVLHTCSTLDMATEHSQKCCEELVAAGAIDTLLGLIRSVSRSIPDQEVLKHALSTLRNLGRYPHLLEVLIQTHNSIQIIVMELLRNKEEGYFIASELMKKICSTHSGVQAVLKSPALLKRLHNLVDELKRKAVYEKRNGRSASAVMKDNRERRLKEAAEILKLIARA 1390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02645 1390 Pfam IQ calmodulin-binding motif 1166 1181 IPR000048 GO:0005515
Aip01g02645 1390 Pfam IQ calmodulin-binding motif 668 686 IPR000048 GO:0005515
Aip01g02645 1390 Pfam IQ calmodulin-binding motif 1122 1138 IPR000048 GO:0005515
Aip01g02645 1390 Pfam IQ calmodulin-binding motif 1040 1057 IPR000048 GO:0005515
Aip01g02645 1390 Pfam IQ calmodulin-binding motif 854 870 IPR000048 GO:0005515
Aip01g02645 1390 Pfam IQ calmodulin-binding motif 1071 1089 IPR000048 GO:0005515
Aip01g02645 1390 Pfam IQ calmodulin-binding motif 901 918 IPR000048 GO:0005515
Aip01g02645 1390 Pfam IQ calmodulin-binding motif 786 803 IPR000048 GO:0005515
Aip01g02645 1390 Pfam IQ calmodulin-binding motif 875 892 IPR000048 GO:0005515
Aip01g02645 1390 Pfam IQ calmodulin-binding motif 1141 1158 IPR000048 GO:0005515
Aip01g02645 1390 Pfam Calponin homology (CH) domain 327 417 IPR001715 GO:0005515
Aip01g02645 1390 ProSiteProfiles IQ motif profile. 1038 1065 IPR000048 GO:0005515
Aip01g02645 1390 ProSiteProfiles IQ motif profile. 1162 1191 IPR000048 GO:0005515
Aip01g02645 1390 ProSiteProfiles IQ motif profile. 785 812 IPR000048 GO:0005515
Aip01g02645 1390 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1122 1185 IPR027417 -
Aip01g02645 1390 ProSiteProfiles IQ motif profile. 968 997 IPR000048 GO:0005515
Aip01g02645 1390 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 823 918 IPR027417 -
Aip01g02645 1390 SMART iq_5 921 943 IPR000048 GO:0005515
Aip01g02645 1390 SMART iq_5 849 871 IPR000048 GO:0005515
Aip01g02645 1390 SMART iq_5 687 710 IPR000048 GO:0005515
Aip01g02645 1390 SMART iq_5 1161 1183 IPR000048 GO:0005515
Aip01g02645 1390 SMART iq_5 782 804 IPR000048 GO:0005515
Aip01g02645 1390 SMART iq_5 664 686 IPR000048 GO:0005515
Aip01g02645 1390 SMART iq_5 748 770 IPR000048 GO:0005515
Aip01g02645 1390 SMART iq_5 898 920 IPR000048 GO:0005515
Aip01g02645 1390 SMART iq_5 1068 1090 IPR000048 GO:0005515
Aip01g02645 1390 SMART iq_5 1138 1160 IPR000048 GO:0005515
Aip01g02645 1390 SMART iq_5 872 894 IPR000048 GO:0005515
Aip01g02645 1390 SMART iq_5 967 989 IPR000048 GO:0005515
Aip01g02645 1390 SMART iq_5 1037 1059 IPR000048 GO:0005515
Aip01g02645 1390 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1250 1282 IPR000225 GO:0005515
Aip01g02645 1390 ProSiteProfiles Calponin homology (CH) domain profile. 307 419 IPR001715 GO:0005515
Aip01g02645 1390 Gene3D - 900 945 - -
Aip01g02645 1390 Gene3D - 847 899 - -
Aip01g02645 1390 Gene3D - 663 713 - -
Aip01g02645 1390 Gene3D - 1035 1099 - -
Aip01g02645 1390 Gene3D - 1138 1189 - -
Aip01g02645 1390 Gene3D - 946 996 - -
Aip01g02645 1390 PANTHER UNCHARACTERIZED 104 1069 - -
Aip01g02645 1390 PANTHER UNCHARACTERIZED 1070 1388 - -
Aip01g02645 1390 SMART arm_5 1239 1284 IPR000225 GO:0005515
Aip01g02645 1390 SUPERFAMILY ARM repeat 1207 1351 IPR016024 -
Aip01g02645 1390 ProSiteProfiles IQ motif profile. 850 879 IPR000048 GO:0005515
Aip01g02645 1390 Gene3D - 783 846 - -
Aip01g02645 1390 ProSiteProfiles IQ motif profile. 1139 1166 IPR000048 GO:0005515
Aip01g02645 1390 ProSiteProfiles IQ motif profile. 665 693 IPR000048 GO:0005515
Aip01g02645 1390 ProSiteProfiles IQ motif profile. 899 928 IPR000048 GO:0005515
Aip01g02645 1390 PANTHER ABNORMAL SPINDLE MICROTUBULE ASSEMBLY 104 1069 - -
Aip01g02645 1390 PANTHER ABNORMAL SPINDLE MICROTUBULE ASSEMBLY 1070 1388 - -
Aip01g02645 1390 SUPERFAMILY Calponin-homology domain, CH-domain 240 502 IPR036872 -
Aip01g02645 1390 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 901 976 IPR027417 -
Aip01g02645 1390 Gene3D - 314 419 IPR036872 -
Aip01g02645 1390 Gene3D - 1191 1359 IPR011989 -
Aip01g02645 1390 ProSiteProfiles IQ motif profile. 1069 1098 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02645 Aip-Chr1 127113488 127122196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02645 829 988 Myosins gene family AT1G04160 29.878 1.02e-06 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02645 K16743 - gmx:100817636 1393.64